G104749


Basic Information

Item Value
gene id G104749
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12634856 ~ 12640227 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130995
ttttttttccgtcttttaagattttattaaaatattctgtaGCGGATTCACCATCACAAACATGATTGTTtctaacagaaaacaaaacaaaattaaaactgagaaatgaacaataaaaaaacaagccttCAGAGTCTAAGTTACAGGggaaagatttatttatttcattttgcagtCAGGTGTCAGAAATCAACAGtttaataagtaaaaaaaaaaaagcaaaaaaaaaaaaaaaaaaaaaaagtgttcacaCAATGTCAAAATGCACTTCCCATTCTCTAAAACTGTTCTCACCAATCAAATCGATTGATTAACAAATCAAAGATCAATCTGACCCACAGTTACCTGTGCCAAGAAAGCATGTCACCCTGTTCTGCTAAACCATCAAGTTTAATTAAGTCACTTCCCCTAcagaacagtgggcagctctaCAGGGTGCACCCCCCCCTTCCTGCATATACATTTCATTCCAATTAAATGCAGCCctgatatacaaaaataataacaagaatacAGGGTTAGCTAGGAatttagaaaacagaaaatacaaaactccATTTCCTCAGGGTTCCACAGTTTCTATACATCATGTtacacacaggagaggagggTGGGGGATAACAAaagaaaccccccaaaaataaacagaaacaaagacgGATATTAAAACAAACGCTGCACTGATCTCTTAGCCCCACAtcacttacaaaaacaaaatatgaactaCTACCACTACCACAGCAAGTAGCACGCACCCAGCCTGCAGGGAAACAGGAAGCCAGATTAAACCAGGAGAACGGAAAAAACACAGTACGAActcaacagaaaaaaagactaaGAAATTACCGTTTATGGTGCAGAAATttcattgaaaaaacaaaaatcaaaacaaaatgcatgagaATTAATACAAAACGGACCACTGTACTcccacagtgctgtgtgtgtgtgtgtgtggggggggggggggggggNNNNNNNNNNNNNNNNNNNNNtgcacagagacagacagacagactgacagaggGAGGGGTTCACCTCTGCCTATACCAGTCTCTCAAGAGTCTCCTGCCCAAACTGCTCCCCCTAACTTCAGTGTGAATGCAGCCGATTGAGCTGGATAAACGAGCCCCTTTTCGCAGTTCTGCGGTCTGCGCTGCTGCCCGCCATGGGGAACAAAACCTTCACTGacagcaaacaatatatatattaaagaaaaaaaaattaaaataaataattaaacaatgctCTTTAAAACCTCATAACTGATCCAATATCTTCTACTGGAAAAACTTAATTTTCCCCCTCTCAGCACTTCAGTGAGGGGTGAGCAGAGGGGCAGCTGGACCTCATTTACCCTGCTGAGGtctttaattgcttaatttgagTCATCAGGATAGGGAGTCAGAGCCCCCGTCTTAATCAGGTAGCTCACTGACGGGCTGTTAACCCCTCGAGGCCTGGAGCCACCCTGCCCTGCATCCATACCTACAGCACAGACTCGCTCCATCCAGCCACACACCGtcactcattcacacacacactcaccctccTAATCATTATCTGTCATTTAAAAGGGGGGGACCACACACCAACATTCTGGTATTTCACAGCACTCTGCTGAACTACCCATTACTTCATTTTCTTATCATAGTTTCCTAAtttaagagtgtgtgtgtatatatatatatatataaaatgtgtgtatatattacacatacaaaTTCAATACCTACTAGTTTGTTtgttaagatttaaaataaaataattaaaaaaaaggccTATAACAAatttatatatctttaaaatactaaaatatacacattatataacCACGCTGTGGTTCCACCCATTTCCATCACTGAATGAAAGCACTGTGGTGCTGAACCGGCCCAGTTCAGCCCTGCTGCTGCTTCCAGCGCATGAGCAGCAGGAAGGGGTGAAATTACATCAGATCACAGAGCTCTACAAGCTCAGTGCCCCCCCCAGGACAAGGGCTGTCCAGCACTGCAGTACAAACCTGCCACCCCCCCAGCACTGAGAGGGACAGAAAACCTCTGACTGCCAAATACACCCACCCTCTTCCTGAAATGGACAGAAGACAGGCAGCAGACAGCTCTGACAGACACAcgcctgcacacacacacacagcaggacaCAGCGGTAGAGCTGGGGAAGGGAGGCAATGACATCAtgaatttataatatatatatatatatatatatatatatatattttatgtttctctttTAAAGAGGATCACGAAAGTACAAAAgacaaaccccccccccaaaaaaaaaaaaaaaaagaaaaatgattgaGTCAAAGCCTGAGATTTCGCAttattcatacatatttttatcaCTGAATTTCAACGACAACGATATACCCAAAGactgttttcttatttgtatttaaaagtatttagcATAGTCTtcttctgtgtttgtatgtcaatgttatttcatgttttcaataggtttttttttttgcatttttttttttttttttttatcttcgtATAGTAAAGACCTCTGTAGTATCtaataaaaactgtacaaaGAGGAAAAGACCATAGAGTACATTCAATACATCTTGACGCTGAGGTACTAGGAGAGTAGATCCCTTGTGACAGAGCAGTTACAAAGATCCGAGGGGATCTTTGGCAGTTATGTTCACAGTGAGTCAATATTCACAGACTGCGCCCCCCTGTGGCCTGGCAGGGACGTGAATGAAACAAGTGTGTCCCTGTCAGGCTGGCACAGGCCGGCCGCTCTGCTACACTGTACAGAGACGAGGCTGCAGttcagagacagagggaaagagagggggatggagagaaaaagagagggggagCCCTGACGGTAAATCAAGCCACTCAGCTGCGCAGACAGGCCCCGCTCTGCGAAGCTGGACATTCCGAGAAATGAGCAGCTGACTGCGCACAGCTCACCCTGTAGCCCTGGGGgttggagagagacagagggtgatagagagagaacaagaaagAGAAGCAAGAGGAGACCATTGCTTCACTGCGGAGAGCGAGCTCAACTCAGTCCACGCGCCTCTGGAAAACAGCGGCTTGCGTCAGAAGAGGACACTGCACCATCTCCtgctccctcgctctctccctccttcccttctCATCTACACTGCCCTGATGTTTGTGGGgatccacacacacatgcgtCAGCCCTTTAACACACACCTGGACTGCTGGAGACCTTACGGGTGGTGGGGATGGGAAACAGAAAGCTCCAATTAAGTTAAAGCAAGTGGTTAAGCACTTAATTCAATGAGGCTGGTGAGTGCAGCAGGGCTGGGATAAGGGTGGCAGCAATCAGACACTGCCCCCTGGTGGTACTGAACTGGCACAACAGCCTTGTGCAGCAGCTCACACCGCGAGCACAGGACAGCACAacgcaaaacaaatgcattggaTTCAAGGGACTTACAGAAACCATTCTAGGCAAATTGCTTTGTATTGAGTTGTACTGCATGccttaaaactatatattttacatatacacacataaaaaggTATTGCAGTTCCTTCCTGAATACCCTGTAGACTTGGCCCATCAAGAAAGAGCAGAAGGGATTGGAGGGTTTCAGGTTTAAgcaaggaggaggagaaggaggaggaggaggagggagcaCAAGTGCTTTCGGGGGGGGGAAGGATGCAGTCTGAGGTTACTAGAAGGAAACCTAGGCAATAAAAATCATGCCAGCCTGACACGCACAAATCCAGAACCCAGAAATCACCAATACCTTTGGCTTCtatattatgattgttattacagttagttattataaaatgttgccaaaccaacaaaagggaatataaaaataatcaaaataaaaataaagatggagTATCAATCTGGACTCCCCAACACTAAAGGGCACTTGTTGAGAATGAcaatgagagggagaggagagcacCACTCCTGCTCAGACCTGCTCAACCAGACCTTCAGACTCAATCCACAGCCACAGCAAGATCACGATAACGAGAGAGCTGCAGCCCAGTCTCCTGCTCCACATTTTGCTTATCGGGTTCCCAcaccattttgtttcagtttttaaaaccaCGAGAAACGCATagtgccccccccccatgcAGGGATGCACACCTGGCACCcaacaacaatcataataatcatgttGTAATAACAACAATGACGACGACGACTACAACATAAGCTAAAGGAAAAGCAAACCCAACTACAAAGACCAGTagtctctctccccccccccctctgcttGGATCCAGATTTAATTATCGCATTTCCCAGAGAACCGGAGGTGTACAGCCAACACAAACCACACGCACCCCACTGAGCAGACAGCAGCCCACGGAGAGTGAGAGGAAGGGCAGACAGGAGAGAgtgaaaagggagagagaaatggagagctGCAGGAGCAAACAACTGGGCTTGCAGGCCGCTGGGTTCTGTTGAGTTTGGAGAGAACGGTTCTGCTCTGTAGGTGCAGTTGTGTCGTGTTCTGCTGGGACAGTAGCGCACAGTTGGGTTCAGGTGGGTCAGCTGTGTGCGGCTGGGTTCTGTTCTACCGGGACAGTAGCGCACGTTGGGTTGAGGTGGGATAGCTGTGTACGACTGGGTTCCGTTCTACCAGGCCAGCTGTGTGCGGCTGGGTTCTGTTCTACCAGGACAGTAGCACACGTTGGGTTTGGGACACCTGCGAGTCCTGTGGGGTTCTGTCCAGCTGGCATCGATTCTGTTGCACCAAGTTTTGTTGGTATTGCTCAGTTCTGTTGGGTATTGCTGGGTCCAGTTTAGTTGGGTAGGTTCTACTGTGCTGTGCTTGGTGCTATCCGGCTGTCCTGTTGCCTTGGTTTTGTATTGCGTTACATTGTGTCATGTCGGACTTGGCAGGGCCCAAGCCATGCCCGCCCCTCCCCAGGGTAGCGGTCACTGCCGCCGTCATGCGTCCTGCAGGGCGGAATGTGACGTGGGATTGGGTCGGGGCTACGGTGGGGGCTATTGGTCAGCCGGGACGTCTCTGTCAGGCTCCGGCTTGGAGGTCTGGCCGGGGgagggtgtgtggggggggtgcgaGATGGGCAGGGGACCGGAGACTAGGCCCTCCACTGTGGCCCCCGCCCCTGGCAGGCTGGCACCACCCACCCCAACGGCCACCATCCCCGCAGGGAACctagagggagggaaggggggagagagagagagagagacggagagataCACAATGAGTGAGAATATggagatgaagatgaagatatTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130995 True 5276 TUCP 0.46 2 12634856 12640227

Neighbor

gene id symbol gene type direction distance location
AMCG00011167 NA coding downstream 29212 12596134 ~ 12605644 (-)
AMCG00011166 NA coding downstream 39443 12582105 ~ 12595413 (-)
AMCG00011155 cdc23,LOC107692994,LOC106603039 coding downstream 78213 12551208 ~ 12556643 (-)
AMCG00011156 NA coding downstream 93479 12529830 ~ 12541377 (-)
AMCG00011157 nhp2,LOC107673822,LOC107590037,LOC107684699,LOC107715316,LOC106603897 coding downstream 107725 12510824 ~ 12527131 (-)
AMCG00011170 NA coding upstream 175200 12815427 ~ 12819344 (-)
AMCG00011173 NA coding upstream 326310 12966537 ~ 12984196 (-)
AMCG00011175 NA coding upstream 345158 12985385 ~ 12986581 (-)
AMCG00011178 slu7,LOC107741361,LOC107550887,LOC107756482,LOC107680665,LOC107676532,LOC107601502 coding upstream 348422 12988649 ~ 12999288 (-)
AMCG00011180 NA coding upstream 364311 13004538 ~ 13013351 (-)
G104697 NA non-coding downstream 110498 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 141755 12429965 ~ 12493101 (-)
G104665 NA non-coding downstream 232292 12402364 ~ 12402564 (-)
G104660 NA non-coding downstream 255189 12375067 ~ 12379667 (-)
G104598 NA non-coding downstream 478125 12156442 ~ 12156731 (-)
G104776 NA non-coding upstream 120818 12761045 ~ 12763667 (-)
G104845 NA non-coding upstream 288445 12928672 ~ 12931083 (-)
G104846 NA non-coding upstream 295255 12935482 ~ 12940160 (-)
G104915 NA non-coding upstream 735906 13376133 ~ 13376997 (-)
G104916 NA non-coding upstream 737830 13378057 ~ 13378299 (-)
G104715 NA other downstream 85863 12548289 ~ 12548993 (-)
AMCG00011152 kcnip1 other downstream 177529 12427993 ~ 12457327 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other downstream 306574 12326097 ~ 12328282 (-)
AMCG00011135 NA other downstream 565777 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 637070 11990829 ~ 11997786 (-)
AMCG00011169 NA other upstream 180798 12821025 ~ 12826880 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 302163 12942390 ~ 12956267 (-)
G104909 NA other upstream 724856 13365083 ~ 13367074 (-)
G104929 NA other upstream 1025568 13665795 ~ 13679262 (-)
AMCG00011211 NA other upstream 1353756 13993983 ~ 13996589 (-)

Expression


Co-expression Network