G104814


Basic Information

Item Value
gene id G104814
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12935436 ~ 12940170 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131072
cattttatttacataatcttTTTACAtcagaaaacatttacacaaataatgtcttcaattgtctttttttgttttgttttttatttccttttctttttcaatgtacAACATTCTCTGATCTGCAAACAGATAAGGAagggggaggaagagaaaaaaaaatacaaagccaaccaccattataaatattaataatttcacaCAGGGGCTGACAATAACTCAGTGTTTTCTACCAGCAAGATGTCCACTCCAGAGGGGTGGGAGTCACAAACCATCACACTCATGTCTCTCGAGAAGGACAGGAGGAAGGTGGGGCCACTGGTAGCAGATGCCAGTCTAGACCAGACCCTATAGTCagcagggggagaggggggggtcTGCAAAACCTGGGAGCACTGCCTTTCTAAATTCtctccaaaataataataacatttccaTCAGTTTAAAGTGATGAGGAAGAGGCCAGTTGTTGGTTTTCCTATTGGCCAACGGACCACAGCTGATATGCCCCCCCAAAGCTAACAGCTCAGACACCCCAGCCCACACCAGTCTTTCATCTGGTGGAAGATTCTCTCGGTTTCATTCACCGTTTTaagcgagtgtgtgtgtttcctaaTTCATCCTAGCTGGATTCCAGTAGAGGAGCGAAGGACAAAAGAATACTGCTACGAGAGTGTGGGTTACCACACAGTGGGAATGCCACATCATGGGAACATCAGCCCTTTGAAGAGATGTTTTTACACAATGGTTTCAATGAGGGACACTAACGTGCACACACAGATTCGCAGGACTGGTTGAGATGTGGCGGACACCTATTGCAGATGTAAAACTTGTAACACTTTAAATCGGATAGGCAACATTGAACATCCCTGGGCAGAAACCTATGAAGGTCCTTTATATCTGAagagactgacacacagcacagctacACAACCTCCTTCCAGCAAGTGGTGCTAAACTTTATATAGAAGCTTCAAACATTCCCCTGCAAAGATCTTAAAAGGCCAAAAGGGTGTTAACCACCAGCATTCAGGAGAGAAGCGCTTGAGACTGCACTGTGCCACATGTCAGATTAGAGTGTCCCTGTAATTTCACACGCGGGTGAAGTAGCGCAACGCCTGCTCTCCTGGAGAAACCACAGAGGGTCTCAAAGAACATCCATCCTAGCCTTCCAGCCGTGGCCATCTGTCCGTCCCTCACCACGTCAACTGTGCTCACATCTAACTCCCACTAACTAGTGAAACGTACATTCGCCTTAACAGGAGTTCACAGACATTGACATGACCACTTCCTAACTGCTAAGGTAAACCAGTCTGCTCCATATGCATTTTATATCAACATGTTTGAACAACGctgttcattattaatttatatttttgtcttgcaTATCagtcagaaacaaatacaaaaagcaaaatggCCCTGGGCATGCGTCCAGCAGAAGAGGCCACTGTACCTGCACTTGCCTGCAGCATGCATGAGAAATCTGGACCTGACTAAGACCACGCTGCACAGCCCTCCATGTACAGATCTGACAACGAACATGTGCTGCCAAGCGCTCGGCATGCGCTAACACCCCATGACAAAGCTCTGCCTCCACAGGCACACAGTCCTGCCCCAATGTTGCATATGAGCACAACTGTGGATTTCACCTGAACTGCACACTGTCACCGATCTTCACTGCTCAGACTGTCAGAAAGGGCCCTGAGAAAACCAAACGCCCTTTATACTGTGTGTGGGGCTTTTCTGTGAAGATTTAGGAAAACACCAAAGGCCCGTTTATTCACCAAGGCAACATGCACTGCAGGATATTCCAGTCAAAGTTAAGGGTAgagtttgcatttatttaaaacaacactaAATCGCCTCAAAACACTCCCATCAGGCTCCCCTGCAGATTCTCTTGTCATTAAGACCCACTCATCAAGAGCACATAAGCCTGTAAAAACAACAGCTAAaagattataattatcattattcatatttcacaacTGCAGTATCTGACATAGAAATGATAACTAAACCTGGCTATAGCAGAGtgacaaagaaaaggaaaaagtgaacacagtctaaatatatatattttttaaatgatgactCAAAAGTGAAAGGACAATCATTTGCTTTCTACATGAAACTGTACCGATACTGGAACTGGAATGGAAACTGCACTCCTCCAGCtcttgaagaaaaaagaaaaagtcttcTGGAGTTGTTACTGTGACTTCACTGCGAGTGAGTGGGCTCTGAGCAGAGCCAAGAGCTACTGTGGCAACTGTCAACATGCAGGGCTGTGCAGAGCCTCTGTGGCCAGTCCACATCAGCTAAGGCTCACATCTCTTTAGAGTTCAAGTTAAGTTTTTCTTTAACGGCACCGGCCCTCTGCACAGTCAGGTCTGGGGCAGGCTTTCAAACGGGCCTTAAAACTCAGGATATCTGTAGTGTGCGACTGCACTAGGGTACGAAGCCACATAATTACTATTAGTTATTTTCACAATGGCCTCCTGTAGCAGGCTGGCCTGCAGCTCTCTGGATGAAAACAGCGATGCACCCCCTCTCCTTTTTGTCAAATGCTTTTAACAGTCACATATAGCAGAGATCAAGACTCTAGGCATTTAGGACCACCAATAGGAGCCAGGCGAGTCTGGGATGAACCACCCTGCCACGCTGACACTCTGGGATCCTtcacacataaaaaaagaatCTGGATGACTTCATAGGGAAAATTCTAAAGAGGTCAAATTCTCGGGAACTCTCACTTGGACActctttgtttggttttattgcaTCGATACGCTTCTGTATAATGTAGATGAAGTaaccaaaacaaagtaaaataaatcatagatTTGAGTCTGGTATAAAAACATGCCACTACGCAAAGGAAATACGCTGCAACAAACTGGGAGGGGAAGCAGAGATTTAGACAGACATTGATGGCAAGAAGCAAGCTGGGGTAggacaaaagaaagaacaggTTAGGAATGTAGGGCATGGGAGTAGAGGACGAAGATGGGCTGAGAAAGAAGGAATAACAAAAAGCGAGTTGGGAGTGAGATTACACTCCTGAGGACCATGGGTACCCAAAGCCTACTGCCCATGCTGTGTGACCCTGGCAGTGGTGGTGGCTGCCTGCCATGCACTGATCAACAAAAAGTCTTATACCCCAGCTACCCAGACTCACTCTAATCTCCTCTACAGAGTTGCTAACCTTTCTTTGGCCCTGCTTTTGCCAACAGTGCAACCAACCCACCAGCAACCCTCCTCCTGGATCTTTGGCATTGGTGATGCTGCTGTTTTGTGCCTAGAATGGACAATAAGTCGGGACTTCAATCGCTACTTAGTTGAATACATCACAAGACATGCCTAATTGAAGagcacacccccccacacatcCCGCAGTGTGGTTTTCATCAATCACAGACTAGTGCTTCTCCCTCCTATTGTTGATTTCAGATCTCGGTCGTCATCTCAGGGTGTTCTGTTACTAATGCTAACAAACTGCTCTCAATGCCGAAATCTCCAGAAGGGCGAGGCGGAACTGCATTAGGGGATCTGTTCTGTGTGCCGGCTTTACCACGCAGCATGGACAAACTACGCAATTATTTCATAAAGCACATTACTTGTCACCCCAAACCACCCCCCCTTCTGACTAATCACAGCTCAATGCTACACACTGgggaataagaataaataaataaaaaaggtggGGGGTGAGCAGAATGGACTAAATACATTAGTGTCATAAACTCTGCACTTCAATTGTCCGGTGCAAAAATGTCAACAGTcagtggggggaggggtggtgggAGAATTGCTGACCCAGAGAAGAACGCTAAGCCGTCAGCAACTTCCTGTGTCTGCACATCTCATAGTGTATGCCCAACTTTAATTCAcatcatcatttttattattgcttgGTGCTGGGGCTGAACGGTCAAAAGTCAGGTGTGTTCACAAGCCAGGTATTCTTGCAGGCATTTCCCACAGTTCACACATCCTGGTCACCACATGCACAGACCCAATGCATACGCTGGAACCTGCGCCCTGATGTTTACAGGATACATTTGGTCGCATTTTCACCGATCATTCACAAACTACCACTTGAGTTACTCAAGTATAGAGCTACGGTGACATTGCCAGCAGAATCGGCACTATGCCATCAAACCCTCTTCAGCATTTCAAGTTCTGAGCCATTGAAGGTCAAAGCGCTGCCACTCTCACAGCTCTGTTAGCCATTAATTTTACAGACAAGGCCAGCCAGCTTTTGAAAACAgcccataaaaaataaacacacattaccACACTACCACTACTAAAGTCTATAGGTAAGGGCTCACACATGGCCAAGTGAGAGGCACTGTGACCTTTCCATGTAATTGAGCTGGGCTGTCTGTGAACTCCAGAGCTTTTCTGCTTGTGCCCTTAACCAGTGCGAGGGGCAGCAGTGACCCTGACCTCCTGAACCCTCCACCGCACCttcccatacacacacactccctctatctctctctctcccttccacGCCCATGTCTTGCAGCAGTGGTCCCAGAGAGCCCCAATCCAATAGCGTCCCTGCGGCTCATTCCTTCTCCACCCACTGCTGAAGAAAGGAATCCAATGAGCACTACTAGGTACACTGATCCTTCCCAATCCTTACAAGGGGGTAATGACAGGAGTGAACCACACAGGCCTGCTTACTTTCTACATGCATTTggatgaagaaaaatatatactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131072 True 4735 lncRNA 0.46 1 12935436 12940170

Neighbor

gene id symbol gene type direction distance location
AMCG00011171 NA coding upstream 7474 12918054 ~ 12927962 (+)
AMCG00011176 NA coding upstream 20365 12901039 ~ 12915071 (+)
AMCG00011168 NA coding upstream 173120 12759630 ~ 12762316 (+)
AMCG00011161 NA coding upstream 270459 12649660 ~ 12664977 (+)
AMCG00011162 NA coding upstream 288486 12643685 ~ 12646950 (+)
AMCG00011172 NA coding downstream 20043 12960213 ~ 12961785 (+)
AMCG00011177 NA coding downstream 59364 12999534 ~ 13004427 (+)
AMCG00011181 NA coding downstream 216081 13156251 ~ 13169149 (+)
AMCG00011184 NA coding downstream 250609 13190779 ~ 13215914 (+)
AMCG00011187 ubtd2,LOC107672801,LOC107718046,LOC108279301 coding downstream 345127 13285297 ~ 13314709 (+)
G104800 NA non-coding upstream 104156 12830849 ~ 12831280 (+)
G104709 NA non-coding upstream 383572 12551040 ~ 12551864 (+)
G104666 NA non-coding upstream 500880 12429496 ~ 12434556 (+)
G104627 NA non-coding upstream 601222 12333328 ~ 12334214 (+)
G104609 NA non-coding upstream 675575 12259612 ~ 12259861 (+)
G104835 NA non-coding downstream 78622 13018792 ~ 13019064 (+)
G104883 NA non-coding downstream 246778 13186948 ~ 13229416 (+)
G104910 NA non-coding downstream 613231 13553401 ~ 13555056 (+)
G104923 NA non-coding downstream 725777 13665947 ~ 13679380 (+)
G104979 NA non-coding downstream 917661 13857831 ~ 13858192 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other upstream 256007 12670376 ~ 12679429 (+)
G104719 NA other upstream 316381 12610129 ~ 12619055 (+)
G104694 NA other upstream 408405 12525360 ~ 12527031 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other upstream 794971 12067451 ~ 12140465 (+)
G104550 NA other upstream 868099 12066494 ~ 12067337 (+)
G104815 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 2210 12942380 ~ 12943082 (+)
AMCG00011204 NA other downstream 928167 13868337 ~ 13878282 (+)
AMCG00011210 bod1,LOC107581912,LOC107661728,LOC107713186,LOC107662284,LOC107587245,LOC108278584,LOC106603873 other downstream 1045495 13985665 ~ 13992845 (+)
AMCG00011209 cpeb4,LOC106603870 other downstream 1072951 14013121 ~ 14061027 (+)
G105139 LOC100846954 other downstream 1679520 14619690 ~ 14620534 (+)

Expression


Co-expression Network