G104915


Basic Information

Item Value
gene id G104915
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13376133 ~ 13376997 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131208
GCGCACTTTGAGACAATACGGCATTCAATCTGAAGTGCATAATCCCACCGTCGACTCAATCCCTTCTGAAAACACCTAGATGTGTTACAATAATCATCAGCATGGAAATACAATAACGCCGATGCCGTTCCTTGTCCTGGGGACGGACACCGGACTCACCTTTGAGCGGCCGTGTTGGCGTCCAGCACCCCGGCGCCCTGCATCCATGTCCGGACGGCGCTCATGCCGGAGCCGAGGGGCTCCTCCTTCATGCTACTCCCGCTCCGCTGGATGCTTTCCTGAATCCCAAACATGAAAACCACCTTTCTTTCACTGACTTCGTCCTgatcttcctcttcttcttctgtctCCCGAGCTCGTCTCTTCAGACCCCGGGTGGAGGATGTGGATAAAGCGGTGGCTGCTGTCTATTAGAGCCGACGCGGCGTGCAGCGTGCCTGGTGTGTGCCGGGCAATTAATGAATCTGTTTATTtcgtatttttctttttcttccaaaaaaaaaaataggatgtatatattaatgtttatcagaggaagaacaaaaaataaaaaataaaagctgtcaGAATCCAAGCTGGGAGACACGAGCAGcacaaacaagaacaacaagcagaaaaagccaaaacacaaatcaatctGCTATGCAAAAGAGTGCAAAGGAAGAAAAGCACACTTGAGGTTTCTCCGCTGTCCCTCCTGTATTAGGATGGAGgctgaataaaaaaaagctcTGATGTCAGTTTAAGAAACAATAGGATCAACTACAGCTTTTCAGACTGTGCTAGATCAAGTGTCATCATCCAGTGACAAGttgtcccccctctctctctctctctctctctctctctctctctctctctcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131208 True 865 lncRNA 0.47 1 13376133 13376997

Neighbor

gene id symbol gene type direction distance location
AMCG00011188 ublcp1,LOC106567438,LOC106603889,LOC107672805 coding downstream 32669 13328493 ~ 13343464 (-)
AMCG00011183 NA coding downstream 183993 13186948 ~ 13192140 (-)
AMCG00011182 NA coding downstream 271578 13056733 ~ 13104555 (-)
AMCG00011179 NA coding downstream 342014 13019906 ~ 13034119 (-)
AMCG00011180 NA coding downstream 362782 13004538 ~ 13013351 (-)
AMCG00011194 NA coding upstream 307637 13684634 ~ 13687704 (-)
AMCG00011200 NA coding upstream 366921 13743918 ~ 13745225 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding upstream 375556 13752553 ~ 13778757 (-)
AMCG00011203 NA coding upstream 479860 13856857 ~ 13858270 (-)
AMCG00011208 NA coding upstream 542671 13919668 ~ 13922667 (-)
G104846 NA non-coding downstream 435973 12935482 ~ 12940160 (-)
G104845 NA non-coding downstream 445050 12928672 ~ 12931083 (-)
G104776 NA non-coding downstream 612466 12761045 ~ 12763667 (-)
G104697 NA non-coding downstream 851775 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 883032 12429965 ~ 12493101 (-)
G104916 NA non-coding upstream 1060 13378057 ~ 13378299 (-)
G104921 NA non-coding upstream 176443 13553440 ~ 13555074 (-)
G104928 clint1a,LOC108441628 non-coding upstream 285189 13662186 ~ 13667716 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding upstream 487524 13864521 ~ 13867615 (-)
G105048 NA non-coding upstream 688344 14065341 ~ 14065908 (-)
G104909 NA other downstream 9059 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 419866 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 549253 12821025 ~ 12826880 (-)
G104749 NA other downstream 735906 12634856 ~ 12640227 (-)
G104715 NA other downstream 827140 12548289 ~ 12548993 (-)
G104929 NA other upstream 288798 13665795 ~ 13679262 (-)
AMCG00011211 NA other upstream 616986 13993983 ~ 13996589 (-)
G105050 NA other upstream 690218 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 1993405 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 2122537 15499534 ~ 15515675 (-)

Expression


Co-expression Network