G104929


Basic Information

Item Value
gene id G104929
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13665795 ~ 13679262 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131246
aattgtttAATGTTATACATAAAAGATCATTATGAGTACAATCAAAACAAGACTTAATTGATTGGAAAAAAGCAATGCCTATTTTTATTAGGAAAGAGGAggctcttgtttattttttatttttttaatcttgcaaTAACTAATAGTGTTTTTAGTAAACTCTCCCAACCCTAAAGCACAGCCCATGGATTTCATGTTACAGAACTgtcatgatttaaaatatttcaatttaaaaccaaaaaaaaaacaaaaaaaaaaactagcccctctcaaaaaaaaaaaaaattatatatatatatataaaaaagaaaagaaaatttgGTCATTTATTAATGTGTAATGCCTCAGAGTCTGACGGAAGgctttttcttgtgtttgttgtcCGACTGTGAACACATCAACTGATGAAGAATGCCTGTAGTCAGTAGAGCACTTTCTGTAGTTTGATACATGATGCGACAGACAGGGCCCCTGGGGGACACGGAGCCTCCTGCAGGACAGGCCCCTGTGACACAGCCTGCttcccttctcctctcctcccttaaGCACTCAAAGCTGCTCCTCACGGCTGGGTCAGCCCCACCCTCCCCACCAGCAGCCACAACCGTTCTGCGTCCAGAGCCACGATCACAACTTTCATCTTTAACTTTAAGAAGACTTGCATATATATAtatatatatatatatatatatatatatttttttttaccatacaCGTCAGAAATTGCACAGATGCTGTCGTGTGACAAGAAAAGTGTTAGGATAGAAATTCAAAACAACTATAATCAAAAGATCAGTCATCTGGATACGGAAATCTAGGGGGAAAAGGgatggacattttgttttgtttt
>TU131247
aattgtttAATGTTATACATAAAAGATCATTATGAGTACAATCAAAACAAGACTTAATTGATTGGAAAAAAGCAATGCCTATTTTTATTAGGAAAGAGGAggctcttgtttattttttatttttttaatcttgcaaTAACTAATAGTGTTTTTAGTAAACTCTCCCAACCCTAAAGCACAGCCCATGGATTTCATGTTACAGAACTgtcatgatttaaaatatttcaatttaaaaccaaaaaaaaaacaaaaaaaaaaactagcccctctcaaaaaaaaaaaaaattatatatatatatataaaaaagaaaagaaaatttgGTCATTTATTAATGTGTAATGCCTCAGAGTCTGACGGAAGgctttttcttgtgtttgttgtcCGACTGTGAACACATCAACTGATGAAGAATGCCTGTAGTCAGTAGAGCACTTTCTGTAGTTTGATACATGATGCGACAGACAGGGCCCCTGGGGGACACGGAGCCTCCTGCAGGACAGGCCCCTGTGACACAGCCTGCttcccttctcctctcctcccttaaGCACTCAAAGCTGCTCCTCACGGCTGGGTCAGCCCCACCCTCCCCACCAGCAGCCACAACCGTTCTGCGTCCAGAGCCACGATCACAACTTTCATCTTTAACTTTAAGAAGACTTGCATATATATANatatatatatatatatatatataaagtgtgaaGGCCACTGACTGCATCGGGGATGCTGTACTAGGTGAGGGATAACCCAGGGACACTGCTCTGTCTACAACTACAGATAACTACAGTTATTACTCAGATGTCAaattgatatacattttttttttataaatatcatttcctttcaaaaataaacccaGCAGAGAAAGGCCATAGAGACGGCCTGTAATTAACAGCCTTTCAGTGTCCTGGTCTCTAATATCAGCGACCCGCTTCAGAAGGCAGGGTTAACCAATTCGGGACAGAGACCAATTCTGGTACGGCAAAGCAGGAGAAGACAATTAAAACCTttgccatttttaaaagtcagtctccaatgataaacaaaaaaacattaaaatgaaaaaaacaatagaagaTTCTAACACGGGTGTGTTGAGATTGCCCTCCAGCATGACTTTGAGTAAGTCTTTAGAAATGCAATAATTTATTTGCACACCAAAAGAATATTTACACAGCTGACCATCGCCCTCCGTGTCAGTGCCGAGCTGTCTGTAGGGTGTGGTGAGGTATGGAATGGCATTTCATATGCTAAAAaactgggggtgggggaagaaaaataattatagataTTTAATATCAGACTCCCAGCTCTGCAATCTCTTCCTGTTAAAATCCctcttttcatttattctttttgtaagaaatgtatgcatgttCTCACACTGGGGTTTGACCCAGTATAGTTATCCtcaatacatttcacacaaaaaacaaacacaaaaggtcCTTGGTTTGAATCAGCatgtcatatatataataaaaggtGACGGCATTTGATATTTTTCAAGTACTCTTTGTGTGCAGCTCTATATATCCTTCATCGTTGGTATGATCTGACAAACTGCTCATCTTCACATcttctctcgctccctctctctcacgtTGTCTCACTTGCCGAAGTTACCGAAATTTGCAAAGGCATCTTGTTTGGGCTGCACCATGGCTGTGTTCATGCCAGCTGCCATGCCCATCGCTGGCATCCCCATGCCCATGGGCCCGGCCATGCCCATCCCTGCCGGGGGCATCCCCATGTTCATATTCATCATACCCTGGCTCGGAGGGATCGCGGTGCCGGTGGCCATGCCCATAGGACTCAAACCCATACCGCCCGTGGCCATGCTGGGGGGCATCCCAATGGCAACCCCTGGGCTGGCCATCATGGGGTTCGTGGGCGGCCGGACGGCCAGAGGGCTGGGCTGGACGTTCAGGTTCATGCCGGCGAAGCTCTGGCCAACTACGTTCAGGGCTGGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131246 False 850 lncRNA 0.36 2 13665795 13679262
TU131247 True 1976 TUCP 0.43 2 13676131 13679262

Neighbor

gene id symbol gene type direction distance location
AMCG00011188 ublcp1,LOC106567438,LOC106603889,LOC107672805 coding downstream 322331 13328493 ~ 13343464 (-)
AMCG00011183 NA coding downstream 473655 13186948 ~ 13192140 (-)
AMCG00011182 NA coding downstream 561240 13056733 ~ 13104555 (-)
AMCG00011179 NA coding downstream 631676 13019906 ~ 13034119 (-)
AMCG00011180 NA coding downstream 652444 13004538 ~ 13013351 (-)
AMCG00011194 NA coding upstream 5372 13684634 ~ 13687704 (-)
AMCG00011200 NA coding upstream 64656 13743918 ~ 13745225 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding upstream 73291 13752553 ~ 13778757 (-)
AMCG00011203 NA coding upstream 177595 13856857 ~ 13858270 (-)
AMCG00011208 NA coding upstream 240406 13919668 ~ 13922667 (-)
G104921 NA non-coding downstream 110721 13553440 ~ 13555074 (-)
G104916 NA non-coding downstream 287496 13378057 ~ 13378299 (-)
G104915 NA non-coding downstream 288798 13376133 ~ 13376997 (-)
G104846 NA non-coding downstream 725635 12935482 ~ 12940160 (-)
G104845 NA non-coding downstream 734712 12928672 ~ 12931083 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding upstream 185259 13864521 ~ 13867615 (-)
G105048 NA non-coding upstream 386079 14065341 ~ 14065908 (-)
G105052 NA non-coding upstream 391142 14070404 ~ 14070969 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding upstream 519565 14198827 ~ 14203536 (-)
G105080 NA non-coding upstream 539693 14218955 ~ 14261910 (-)
G104909 NA other downstream 298721 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 709528 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 838915 12821025 ~ 12826880 (-)
G104749 NA other downstream 1025568 12634856 ~ 12640227 (-)
G104715 NA other downstream 1116802 12548289 ~ 12548993 (-)
AMCG00011211 NA other upstream 314721 13993983 ~ 13996589 (-)
G105050 NA other upstream 387953 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 1691140 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 1820272 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 2284076 15963338 ~ 15973872 (-)

Expression


Co-expression Network