G104998 (rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500)


Basic Information

Item Value
gene id G104998
gene name rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13864521 ~ 13867615 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131342
TCACAATCCCTCCTTCTGCATTTGATCAATAACCTCTTATTCAAGAGCACTTTTGAAAACTCACCATTGCCTTCTAGCCTGTGTTTGGGTATAAGGTAAACCCTTTACCAGAGCCCTCCCAGTGAAGTCTCTCCCACTTGGGCTGCCTGCAATTCTGAGATCCTTTAGTGTTTTAAATTCTCACAAGTCCAAAGAATTTCAGTAATGACACAGACACTTCCTtccttttttgatttttttttttacagtcttttattgtttttaccaAAACGTTGGTCATTTCACTCCTGCATCTTCTCAATGGTCTCCTCCTTGTATTTGCCTTTCTCCTTGCCATCCTGGCGAGACTTGGCTTTGCGTTCCAGGATCTTCTTGCGATCCTTGTCCAGCTTCAGCCTGGTGATCACCACCTAGAAAGAACCGCACAGACCGGTCAGACACGCGTGCCATTGCCGCCCGGATCTCCAGGTCAGACCCTCATGTGCATATTGTGGACACCATACACAACATACTGTGCGGAAACAGTTCTTAAAGGAATCCCGGAATCTCGACTATAATAAAATGCACTGTTTGGAGATTAAGCAGTGcccaattaaaatgttagagATGCCTCATTCTTGCAGGATGCTTTTAAGTAGCTACTCTATTCCAAACTGCACAAACTCTCAACCGATACAAAGTGTATTTAAACTCTGTTCAAGGGCTACAAACATCTAAAGTTTCACAGCAGAGTAAGTAACTGCAGAAATAACAATTACAACTTCATGAGGCAAGGATAATTACTAAATCTCTTAGCGTGCCGCTCACATTCATCTCATGCTGACAGAAAAGCACAAACCGTTTcagctctggaaaaacaaagcacCTGCATGCAACAGAAAAAGCAGAACGGAGAGAGGGCACCTTTAAAAAAACTGCCAGGATAACTAAAGCACAGTCCAATTTGCTGCAATCAACTTGGGAAGACATTCATTACAGATCTACTGCAGAGAACAGACAATAGACCCATCTTTCAGTGAAGCCGAACTGAGGATTAATGCCAAACATTTACAGGTTAAGAAACGGGcagggggtggaggaggagacCGCGTACCTTGCTGGGGTGGATGCCAACATGTACTGTGGTTCCGTTGGCCTTCTCTCTCTGCACGCGCTCAATGTAGATGACGTACTTCTTCCTGTACACCTGAACCACCTTCCCGATCTGCTGGCCTTTGTAGTGGCCACGGACAACCTGCTGGACCTCGTCGTCCTTGCGGATGGGCATGGAGCGCACGTTGTACTTCTGCCGGAGCTCCTTGGACAGGGGAGATGACATGATCTTCCTGCGGATGTGAGACGGGGCATTGAAGTGTCTCTTGCGGTTCTTGCGGCGAGACGACGTCACAAACGGATTGAGCTTCATGATGGCTGTGGGACGGAGGAGAGAGAAGTCAATACAATACAGGTTTGTTCATACAATACAAAGAGGCTCATGTTGTACACCACCAACAAACTACACCAGATTTCAAACTGCTGGAGCCAGCTGTAATAACCAGGTGAAGACATTACACTGAATAGCCTGAATGAGACTCCCCTGCTGTAAGTTTGAGGCATGTCAGGTACCTCCAACTGCAGTCTCAAAGTCGACCCTAGGCTCTGGGAATTTCAAGGCCTACCTTGAGTACATCTGCACATACAGACACCCTTTCAATAACAGCCTGCAGTTTTTGTTAGCGATACACCAAGATCCTGAAGCTcacaaaacaggaaatggaTCAAGACAATACTGTGCCAGATAGATGTGCAATCCAACGACTGTGGCCCCATTAGTGTCCAAAACCAACTGTCTACATACCATTAAATACGACACTTGGGAAGTTAGCTGGCTATTACAACTGGggtgaaacaaatgaaaactacaCCGCTTTCCTGAAACTAACAACAACACACCCAAAAGCATCACTGCTGCGTTACATATCACctaaatataatgaaaacaaggcctgtatgttttaagaaataagCAAATGAGAATAACATCTGCACATCACATGCTTAACACAAACGGATTGTTTTAGGGATTTAAAACAAGATGTACCAATACAGAACCAAAAACGAAGCTTACAACCTGGCCGTGCTCAGACATATTGCCAAATTAAAGCGTCCAACACGAGGTAACCATCTATCCAAAAGTATCAAATCAACCGACACAAGGCCTGGATCTGTCGTTTTTATTGGCCTCCACTAACAATGAATCAACCTCCACAACACTTTCAGCTCGTTTTTTATAACTAGTTTTGAAATAACGAAAACAGGCGGAACTACCTGGGAAAACCTCTCCAGCTAATGAACTCGTTTAATGCTGGGTAGCTGGAGCCTGGTGCCATTctgggttttattatttattggaaaCACAAAACGCTATTTACGTGCAAACGGGGTGTTTCTACAACGATATTTAAAGCCTACAGTAACACATAGAATAAATGCAGCCCCCGTCTCCCACCACAGGCCGACCCAGACTTTCACCAGGGCTGATCAGTTTGTGTTTAACTACTCATCTCTTGACAATAATGGCAGTACAGCACTCATCACATTCCCCATTTATCAATACGAGGGGTACAGTGCGGTGCCCGGTCGAACAGACCAGGATGGCCACAGATAACTTTGAAGCAATTTCACTCCAGCAGATCTTACCCTGCCGATCAGTCCACTATGGCCGCCGGAAAAGAGAGTTTAGAAGCACTTCCGCTCACATTAGTTGGC

Function

symbol description
rpl26l1 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and ribosomal large subunit biogenesis. Located in extracellular exosome.

NR:

description
60S ribosomal protein L26

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131342 True 2748 lncRNA 0.45 3 13864521 13867615

Neighbor

gene id symbol gene type direction distance location
AMCG00011203 NA coding downstream 6251 13856857 ~ 13858270 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding downstream 85764 13752553 ~ 13778757 (-)
AMCG00011200 NA coding downstream 119296 13743918 ~ 13745225 (-)
AMCG00011194 NA coding downstream 176817 13684634 ~ 13687704 (-)
AMCG00011188 ublcp1,LOC106567438,LOC106603889,LOC107672805 coding downstream 521057 13328493 ~ 13343464 (-)
AMCG00011208 NA coding upstream 52053 13919668 ~ 13922667 (-)
AMCG00011207 stc2 coding upstream 71744 13939359 ~ 13946548 (-)
AMCG00011216 LOC107713182,LOC107587250,LOC107684217,LOC107581908,LOC107661723,LOC108429399,LOC107727287 coding upstream 344010 14211625 ~ 14340740 (-)
AMCG00011222 stk32a,LOC107692947,LOC108414397,LOC107713578 coding upstream 597542 14465157 ~ 14467077 (-)
AMCG00011223 stk32a,LOC104947536,LOC106965095 coding upstream 614755 14482370 ~ 14489581 (-)
G104928 clint1a,LOC108441628 non-coding downstream 196805 13662186 ~ 13667716 (-)
G104921 NA non-coding downstream 309447 13553440 ~ 13555074 (-)
G104916 NA non-coding downstream 486222 13378057 ~ 13378299 (-)
G104915 NA non-coding downstream 487524 13376133 ~ 13376997 (-)
G104846 NA non-coding downstream 924361 12935482 ~ 12940160 (-)
G105048 NA non-coding upstream 197726 14065341 ~ 14065908 (-)
G105052 NA non-coding upstream 202789 14070404 ~ 14070969 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding upstream 331212 14198827 ~ 14203536 (-)
G105080 NA non-coding upstream 351340 14218955 ~ 14261910 (-)
G105105 NA non-coding upstream 552086 14419701 ~ 14420053 (-)
G104929 NA other downstream 185259 13665795 ~ 13679262 (-)
G104909 NA other downstream 497447 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 908254 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 1037641 12821025 ~ 12826880 (-)
G104749 NA other downstream 1224294 12634856 ~ 12640227 (-)
AMCG00011211 NA other upstream 126368 13993983 ~ 13996589 (-)
G105050 NA other upstream 199600 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 1502787 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 1631919 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 2095723 15963338 ~ 15973872 (-)

Expression


Co-expression Network