G105050


Basic Information

Item Value
gene id G105050
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14067215 ~ 14068561 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131409
CACTATCAGACCTCCACCAGAATATTAATAATTCTCTCTCTATGCTgattagttgttttttgtacatATTGTAGCAAGCCGCTGCAAGATGGGTGAAGATGTTTTCAGCTTTCCACATGAAAGAGATCTGACACCCACAAAGAAGCCTGGAGTGAAACATGCTGTTCTCAAAACAATATCTAAAATGCTGcaagaaaatgaatgcattagaAGAAGGCTGATAACTAACAGTCAGCTTGGCCACACAGATCACAGaacagtggaagtgcatgatGCCAAGACAGTTTCCAATATGCCGGGGTGGATGCAGCCCGCGCCGACTGCCTGGGAGCTCTGCCTAGCTGACCACAGCCAGTGTTGTGTGGGCTCTGGAGACGGCAGGGGCTCCTTGTTGCTGGCTGGTCCCCTGCGGAGCTGCTGAGTCTGTCCTCTGTTTGACACTCaagctctgctgtttgtgttccAGGATTGCAGTCTTTAACCTgagacaaaacaatataaaagagAATAAAAGAGGAGACGTGTTGCTTTGTGTCTCACggcattgtgtttgtgtttgtacgATAATGAGATCACAATCTGATAATAAAACTGCAGATCTGCTTAGTCTGAAAGATGACTGGAAGTTGTCGATCTagtaatacagtgagggaaaaaagtatttgatcccctgctgattttgtacgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131409 True 689 TUCP 0.45 4 14067215 14068561

Neighbor

gene id symbol gene type direction distance location
AMCG00011207 stc2 coding downstream 120667 13939359 ~ 13946548 (-)
AMCG00011208 NA coding downstream 144548 13919668 ~ 13922667 (-)
AMCG00011203 NA coding downstream 208945 13856857 ~ 13858270 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding downstream 288458 13752553 ~ 13778757 (-)
AMCG00011200 NA coding downstream 321990 13743918 ~ 13745225 (-)
AMCG00011216 LOC107713182,LOC107587250,LOC107684217,LOC107581908,LOC107661723,LOC108429399,LOC107727287 coding upstream 143064 14211625 ~ 14340740 (-)
AMCG00011222 stk32a,LOC107692947,LOC108414397,LOC107713578 coding upstream 396596 14465157 ~ 14467077 (-)
AMCG00011223 stk32a,LOC104947536,LOC106965095 coding upstream 413809 14482370 ~ 14489581 (-)
AMCG00011230 NA coding upstream 477510 14546071 ~ 14576028 (-)
AMCG00011231 NA coding upstream 580817 14649378 ~ 14676424 (-)
G105048 NA non-coding downstream 1307 14065341 ~ 14065908 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding downstream 199600 13864521 ~ 13867615 (-)
G104928 clint1a,LOC108441628 non-coding downstream 399499 13662186 ~ 13667716 (-)
G104921 NA non-coding downstream 512141 13553440 ~ 13555074 (-)
G104916 NA non-coding downstream 688916 13378057 ~ 13378299 (-)
G105052 NA non-coding upstream 1843 14070404 ~ 14070969 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding upstream 130266 14198827 ~ 14203536 (-)
G105080 NA non-coding upstream 150394 14218955 ~ 14261910 (-)
G105105 NA non-coding upstream 351140 14419701 ~ 14420053 (-)
G105107 NA non-coding upstream 358858 14427419 ~ 14434667 (-)
AMCG00011211 NA other downstream 70626 13993983 ~ 13996589 (-)
G104929 NA other downstream 387953 13665795 ~ 13679262 (-)
G104909 NA other downstream 700141 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 1110948 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 1240335 12821025 ~ 12826880 (-)
G105290 LOC108429417 other upstream 1301841 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 1430973 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 1894777 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 1974810 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 2875371 16943932 ~ 16961069 (-)

Expression


Co-expression Network