G105052


Basic Information

Item Value
gene id G105052
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14070404 ~ 14070969 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131411
TGACACTTTCACAAcacaattgaaaacaattttatttttttatttgcatatccCTAAATCCCAACAGAACAATCCACTGAGTATATAAGTGAATCTAACAGATTACATACAAGatcattagaaaatatatttacacatatttctCTCTAAGAAGAGAACACATACATTCATCGTTGTTTAACATGacaatattcagaaaataacaacagaaaTGCAAGAACAGTATGTATCAGAACAGTGAGAAAACATGAACCAGAGCAAAACGACTCCTTTTGCATCAGATTCTACTACTTCCGTTCCCGTCAACCCACCCAAACAGAGGTCCTTCCTAGttaagcaaataaacaaacaaaacaatatttagcaCAGATACCTTCTGGCAGGTTGCATCGCAAAGTGTATCTCATCAAAATCATTGGCTTACATCAATCATTAAAGATACAATTAGTGGGAACGACTGGTACTACAAACAGAAATCACCCATTATCATCACATCTTATTGCATCACAGGTTATTGAAGTTAACTGAAGaattatacagtgggggaaaacagtatttgatcccct

Function

NR:

description
PREDICTED: oxysterol-binding protein-related protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131411 True 566 lncRNA 0.34 1 14070404 14070969

Neighbor

gene id symbol gene type direction distance location
AMCG00011207 stc2 coding downstream 123856 13939359 ~ 13946548 (-)
AMCG00011208 NA coding downstream 147737 13919668 ~ 13922667 (-)
AMCG00011203 NA coding downstream 212134 13856857 ~ 13858270 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding downstream 291647 13752553 ~ 13778757 (-)
AMCG00011200 NA coding downstream 325179 13743918 ~ 13745225 (-)
AMCG00011216 LOC107713182,LOC107587250,LOC107684217,LOC107581908,LOC107661723,LOC108429399,LOC107727287 coding upstream 140656 14211625 ~ 14340740 (-)
AMCG00011222 stk32a,LOC107692947,LOC108414397,LOC107713578 coding upstream 394188 14465157 ~ 14467077 (-)
AMCG00011223 stk32a,LOC104947536,LOC106965095 coding upstream 411401 14482370 ~ 14489581 (-)
AMCG00011230 NA coding upstream 475102 14546071 ~ 14576028 (-)
AMCG00011231 NA coding upstream 578409 14649378 ~ 14676424 (-)
G105048 NA non-coding downstream 4496 14065341 ~ 14065908 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding downstream 202789 13864521 ~ 13867615 (-)
G104928 clint1a,LOC108441628 non-coding downstream 402688 13662186 ~ 13667716 (-)
G104921 NA non-coding downstream 515330 13553440 ~ 13555074 (-)
G104916 NA non-coding downstream 692105 13378057 ~ 13378299 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding upstream 127858 14198827 ~ 14203536 (-)
G105080 NA non-coding upstream 147986 14218955 ~ 14261910 (-)
G105105 NA non-coding upstream 348732 14419701 ~ 14420053 (-)
G105107 NA non-coding upstream 356450 14427419 ~ 14434667 (-)
G105112 NA non-coding upstream 376369 14447338 ~ 14449781 (-)
G105050 NA other downstream 1843 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 73815 13993983 ~ 13996589 (-)
G104929 NA other downstream 391142 13665795 ~ 13679262 (-)
G104909 NA other downstream 703330 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 1114137 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 1299433 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 1428565 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 1892369 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 1972402 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 2872963 16943932 ~ 16961069 (-)

Expression


Co-expression Network