G105370


Basic Information

Item Value
gene id G105370
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15859758 ~ 15861690 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131797
GGTAGATACAGCTTTATGATTTGGGTCGCTATGAATTGTGGGAATTAAGACACTGCCCAGACTTGTTGTATTGGAGCCGCTGAAGACAGTAGACATATTGCTGTGCTTTATTCTGTAATCTGTTGCCTAGCAATGTGCACCTAAAAAGCAAGGGCACCTTTGAAGATGCAgggaattaaaaacagaaatgtaaacaaagacCACACAGGTAAACCCTGCTTTAGGCATATGGACAAGGTATCTGTTCATTTTCAAAGGCtgaatgttttttgtcttcttttcttATTACCGCagtaaagagaaaatgtattactgtagtATTTACATAAGCCTGGAAAGTAACAATAGAGATTAAGTATTAattaagaatgttttatttttttagaaaaggAGCTAGagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131797 True 400 lncRNA 0.36 2 15859758 15861690

Neighbor

gene id symbol gene type direction distance location
AMCG00011256 NA coding upstream 33189 15825613 ~ 15826569 (+)
AMCG00011254 NA coding upstream 60265 15755286 ~ 15799493 (+)
AMCG00011257 NA coding upstream 195717 15649737 ~ 15664041 (+)
AMCG00011249 cnot6 coding upstream 293902 15556848 ~ 15565856 (+)
AMCG00011247 ndfip1,LOC106567495 coding upstream 455536 15389603 ~ 15404222 (+)
AMCG00011258 pitx1 coding downstream 86949 15948639 ~ 15953777 (+)
AMCG00011262 sar1b,LOC107603246,LOC107713617,LOC107668454,LOC107657201 coding downstream 169384 16031074 ~ 16033025 (+)
AMCG00011270 NA coding downstream 258178 16119868 ~ 16124691 (+)
AMCG00011269 ppp2ca,LOC107603261,LOC107692973,LOC107728270 coding downstream 271762 16133452 ~ 16141505 (+)
AMCG00011267 skp1,Skp1,SKP1 coding downstream 282149 16143839 ~ 16148914 (+)
G105365 NA non-coding upstream 20653 15821308 ~ 15839105 (+)
G105238 NA non-coding upstream 576010 15280455 ~ 15283748 (+)
G105226 NA non-coding upstream 603136 15249738 ~ 15256622 (+)
G105186 NA non-coding upstream 930818 14928643 ~ 14928940 (+)
G105145 atp10d,atp10b non-coding upstream 1188209 14671298 ~ 14671549 (+)
G105390 ddx46 non-coding downstream 134687 15996377 ~ 15997732 (+)
G105434 NA non-coding downstream 194475 16056165 ~ 16056449 (+)
G105436 NA non-coding downstream 201224 16062914 ~ 16063749 (+)
G105438 NA non-coding downstream 205543 16067233 ~ 16067442 (+)
G105448 NA non-coding downstream 271068 16132758 ~ 16132987 (+)
AMCG00011252 NA other upstream 3974 15853764 ~ 15855784 (+)
AMCG00011253 NA other upstream 7369 15850646 ~ 15852389 (+)
AMCG00011250 NA other upstream 372386 15472259 ~ 15487372 (+)
AMCG00011241 LOC102221627,LOC107740141,LOC107680337,LOC107593202 other upstream 537100 15320780 ~ 15322658 (+)
G105139 LOC100846954 other upstream 1239224 14619690 ~ 14620534 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other downstream 1342 15863032 ~ 15873489 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other downstream 101650 15963340 ~ 15984079 (+)
AMCG00011268 NA other downstream 243896 16105586 ~ 16110381 (+)
AMCG00011293 plac8l1 other downstream 1116802 16978492 ~ 16982241 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other downstream 1922473 17784163 ~ 17788050 (+)

Expression


Co-expression Network