G105466


Basic Information

Item Value
gene id G105466
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16200049 ~ 16200299 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131909
GGAAAAGGCAATTTCACCGTTTTCTGACATCATATATTTTTGCGTAGTGAGCCCCTTTATGAAGGGACAGTAAAAGCTGTGAACATGTTAAGTTacaccattttacattttacccgtTTGCAATATCAATTGTGTATATCTCAGCTATTGTTAATTTATAACAACACGTATTAAGCGTTTTGAAGACTATAGTCCAAAAGATGCATGAAAACAGTCCTTTCATATATGTTAGTCGAcccataaaatacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131909 True 251 lncRNA 0.33 1 16200049 16200299

Neighbor

gene id symbol gene type direction distance location
AMCG00011267 skp1,Skp1,SKP1 coding upstream 51135 16143839 ~ 16148914 (+)
AMCG00011269 ppp2ca,LOC107603261,LOC107692973,LOC107728270 coding upstream 58544 16133452 ~ 16141505 (+)
AMCG00011270 NA coding upstream 75358 16119868 ~ 16124691 (+)
AMCG00011262 sar1b,LOC107603246,LOC107713617,LOC107668454,LOC107657201 coding upstream 167024 16031074 ~ 16033025 (+)
AMCG00011258 pitx1 coding upstream 246272 15948639 ~ 15953777 (+)
AMCG00011276 vdac1,LOC107557296,LOC106603817,LOC106567523 coding downstream 33306 16233605 ~ 16240750 (+)
AMCG00011275 cunh5orf15,kct2,si:ch73-269m14.2,c18h5orf15,LOC107557298 coding downstream 43028 16243327 ~ 16247084 (+)
AMCG00011278 NA coding downstream 225715 16426014 ~ 16427017 (+)
AMCG00011277 NA coding downstream 252771 16453070 ~ 16471261 (+)
AMCG00011280 NA coding downstream 506028 16706327 ~ 16712776 (+)
G105448 NA non-coding upstream 67062 16132758 ~ 16132987 (+)
G105438 NA non-coding upstream 132607 16067233 ~ 16067442 (+)
G105436 NA non-coding upstream 136300 16062914 ~ 16063749 (+)
G105434 NA non-coding upstream 143600 16056165 ~ 16056449 (+)
G105390 ddx46 non-coding upstream 202317 15996377 ~ 15997732 (+)
G105538 NA non-coding downstream 524389 16724688 ~ 16725153 (+)
G105684 NA non-coding downstream 1109460 17309759 ~ 17312068 (+)
G105715 NA non-coding downstream 1178321 17378620 ~ 17378860 (+)
G105756 NA non-coding downstream 1534691 17734990 ~ 17742387 (+)
G105769 NA non-coding downstream 1550951 17751250 ~ 17751484 (+)
AMCG00011268 NA other upstream 89668 16105586 ~ 16110381 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other upstream 215970 15963340 ~ 15984079 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other upstream 326560 15863032 ~ 15873489 (+)
AMCG00011252 NA other upstream 344265 15853764 ~ 15855784 (+)
AMCG00011253 NA other upstream 347660 15850646 ~ 15852389 (+)
AMCG00011293 plac8l1 other downstream 778193 16978492 ~ 16982241 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other downstream 1583864 17784163 ~ 17788050 (+)
AMCG00011328 NA other downstream 2906974 19107273 ~ 19117369 (+)
G105916 NA other downstream 3021756 19222055 ~ 19222421 (+)
G106139 LOC108275110 other downstream 3894930 20095229 ~ 20162966 (+)

Expression


Co-expression Network