G105607


Basic Information

Item Value
gene id G105607
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16893960 ~ 16895074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132092
GGGTAAGTGGTGAGCAGGGGGCAGAGCAAGAGCAAGGGcgtttcattaattaattacttttcccCCCGAATAGTCACACATTGTTTTGGCCAGGCGGGAAACATAACTGCAGGGAACCTGAAATGACTGACACCAACATCTATGTGCAACGGTCTCCaatatgtttaatttgctttggTTCACAGAAGATTTTTCTTGCATGGGTTGTTTTATTACTGCACCAGAAGCATCATATATTTAATTCCAATGCATTACTAACAGATTTACAGATTACttaaaaaatgatgtgaatTTCAGAAGGCAAACATACAGGAGTACAATTAATAAAGAACTACATGCTTGTGCAAGTTAATCATTCTTTCTAGCGATCTCTCGGAACACTTTCTGAAGACATTTATTCACATTAGCGCTATATCTTTATCAGTAATACAAATGTGCAAGTTATCTTTCAAAATATCTAACCCTTATAATCTTTCAATTCTGCAGAGACATATGTATGCTGCAATTTGAAAGGGAGATGCTTTGAAGAGATTGTTACTGTTCAGTTTCAAGTTAAATCAGTAAAAAacgtatttttaaacaaaacagaaaaatcaagGTCTGCAACCCAACGtcaacatttacaaatcacaatGCACATCTGTGTTTAAGGAAAACAGGCGAAACATCATTGGAAATTAAGaaactttttccattttaaaggctgggatgcaattattattatttttaattattCCAAGATAACATACATAAAGTCACAGAGATTTTGATGAACTGAAGGAGAACGAACAGCAACTTCCTCTCAGCATGCCACCTTGTGATGCTCTTCAGGTCAATGAAGATATGAGTTTAGCGATGCAACACTTGACTTCACAATCTCTGAGCACTGCTCAATGTTCTTTTTAATCCTGTAGAAATGCTCCACGTACTCTGAGCGGCCCAGCAGCTCCACAAAGTCTTCATCGTGGGTGATGACCAACAACTGGAAGTTACGTTGCCTGGAACGGCTCTTAATGATCCTGTAAGAAGGAAATCAGtgatataacaataataataataataaagctttgtTGTCCATTAAAAGAATGTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132092 True 1093 lncRNA 0.36 2 16893960 16895074

Neighbor

gene id symbol gene type direction distance location
AMCG00011286 NA coding downstream 89670 16776351 ~ 16804290 (-)
AMCG00011282 NA coding downstream 129465 16753656 ~ 16764495 (-)
AMCG00011284 NA coding downstream 147748 16745597 ~ 16746212 (-)
AMCG00011283 NA coding downstream 194039 16664913 ~ 16699921 (-)
AMCG00011281 NA coding downstream 229556 16637296 ~ 16664404 (-)
AMCG00011292 kif3a coding upstream 15246 16910320 ~ 16920194 (-)
AMCG00011291 pou4f3,LOC106603866,LOC106567605 coding upstream 39432 16934506 ~ 16935842 (-)
AMCG00011294 NA coding upstream 83524 16978598 ~ 17004504 (-)
AMCG00011297 kctd16,LOC106603861 coding upstream 252941 17148015 ~ 17159586 (-)
AMCG00011299 kctd16,LOC106603861 coding upstream 278623 17173697 ~ 17203530 (-)
G105553 NA non-coding downstream 168807 16655247 ~ 16725153 (-)
G105479 NA non-coding downstream 646659 16244696 ~ 16247301 (-)
G105473 vdac1,LOC106567523,LOC107557296 non-coding downstream 656275 16236128 ~ 16237685 (-)
G105454 zgc:56064,LOC102205414,LOC107684868,LOC107564119 non-coding downstream 752622 16139099 ~ 16141338 (-)
G105427 sar1b,LOC106940938,LOC107657201 non-coding downstream 858937 16032251 ~ 16035023 (-)
G105701 NA non-coding upstream 414716 17309790 ~ 17312068 (-)
G105752 NA non-coding upstream 664328 17559402 ~ 17561795 (-)
G105761 LOC103029292,LOC108441031,LOC106604913,LOC108424167,LOC103354367 non-coding upstream 669095 17564169 ~ 17566963 (-)
G105774 NA non-coding upstream 859253 17754327 ~ 17755758 (-)
G105782 NA non-coding upstream 902369 17797443 ~ 17800287 (-)
AMCG00011271 LOC107562913 other downstream 795781 16043371 ~ 16098179 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other downstream 920088 15963338 ~ 15973872 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other downstream 1378285 15499534 ~ 15515675 (-)
G105290 LOC108429417 other downstream 1520781 15370402 ~ 15373179 (-)
G105050 NA other downstream 2825399 14067215 ~ 14068561 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 48858 16943932 ~ 16961069 (-)
AMCG00011313 NA other upstream 822552 17717626 ~ 17751099 (-)
G105770 NA other upstream 856179 17751253 ~ 17751502 (-)
G105793 NA other upstream 1104594 17999668 ~ 18000445 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other upstream 1285572 18180646 ~ 18191195 (-)

Expression


Co-expression Network