G105715


Basic Information

Item Value
gene id G105715
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17378620 ~ 17378860 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132235
AGACTATTCCAAAGGCGAGGGGCTGCAACAGAGAAGGCAGGATCCCCTTTAGTTTTCAAACGAGATTTAGGGACACTTAAAAGCAAACTCTGTGAAGATCTTAAAAATCTAACGGTTTGATATTAATGtaagaaatctaaaatataatcTGGTGCAAGTCCATGTAAACCCTTAAAAACCATTAAGAGAATCTTAAATTGAACTGGAAGCCAATGCAACGAGGCTAAGACTGGAGAAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132235 True 241 lncRNA 0.37 1 17378620 17378860

Neighbor

gene id symbol gene type direction distance location
AMCG00011300 LOC105025958 coding upstream 70796 17295543 ~ 17307824 (+)
AMCG00011302 NA coding upstream 117403 17260015 ~ 17261217 (+)
AMCG00011298 yipf5,LOC107713174,LOC102777143 coding upstream 156101 17219688 ~ 17222519 (+)
AMCG00011296 NA coding upstream 359314 17009308 ~ 17019306 (+)
AMCG00011295 NA coding upstream 370334 17006454 ~ 17008286 (+)
AMCG00011309 NA coding downstream 38735 17417595 ~ 17426498 (+)
AMCG00011307 rasgef1c,LOC102777120 coding downstream 165905 17544765 ~ 17556370 (+)
AMCG00011308 LOC108441031 coding downstream 184725 17563585 ~ 17568228 (+)
AMCG00011312 NA coding downstream 192265 17571125 ~ 17579716 (+)
AMCG00011310 gblp,LOC108268614,LOC107599381,LOC103033914,LOC108441034 coding downstream 366802 17745662 ~ 17750420 (+)
G105684 NA non-coding upstream 66552 17309759 ~ 17312068 (+)
G105538 NA non-coding upstream 653467 16724688 ~ 16725153 (+)
G105466 NA non-coding upstream 1178321 16200049 ~ 16200299 (+)
G105448 NA non-coding upstream 1245633 16132758 ~ 16132987 (+)
G105438 NA non-coding upstream 1311178 16067233 ~ 16067442 (+)
G105756 NA non-coding downstream 356130 17734990 ~ 17742387 (+)
G105769 NA non-coding downstream 372390 17751250 ~ 17751484 (+)
G105776 phykpl,LOC100691570 non-coding downstream 387031 17765891 ~ 17768221 (+)
G105792 NA non-coding downstream 620776 17999636 ~ 18000343 (+)
G105794 NA non-coding downstream 653895 18032755 ~ 18033025 (+)
AMCG00011293 plac8l1 other upstream 396379 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 1268239 16105586 ~ 16110381 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other upstream 1394541 15963340 ~ 15984079 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other upstream 1505131 15863032 ~ 15873489 (+)
AMCG00011252 NA other upstream 1522836 15853764 ~ 15855784 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other downstream 405303 17784163 ~ 17788050 (+)
AMCG00011328 NA other downstream 1728413 19107273 ~ 19117369 (+)
G105916 NA other downstream 1843195 19222055 ~ 19222421 (+)
G106139 LOC108275110 other downstream 2716369 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 2917151 20296011 ~ 20339325 (+)

Expression


Co-expression Network