G105778 (LOC105024433,LOC107752029,LOC107743918,LOC106604409)


Basic Information

Item Value
gene id G105778
gene name LOC105024433,LOC107752029,LOC107743918,LOC106604409
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17784163 ~ 17788050 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132321
GTGGAATTTGCAGTTGCAGCTGCTGACGATTTCACTCCTCCTCTCTTCCACTTTCAGGCCGCACTCATGGCAGAGCCTCCTGCAGCTGCGCTTCTCCCACTGGGAGAGGTTCTTGCCACTTTGCAGACACTCCCTGGCCTCCGTGCCGTGCAGCCCCATGCTGGCGTTCTTGGCGCAGTAATCCGGGGACTCTTCCAGGTAGATGAGCTCTGTCCGGGCGATGGTGCTGAAAGCCTCCGCGATGGCCCCTCGGTTGTCGGCGCTGTTGCCGGCTCGCATCCTCCTCTTGTCCATCTCCAGTTTCTGGGCTTGGTCGTGCTTCACTTTCAGGTAGTTCCCGATGTCTCTGAACTCGGACAGCTGGAGCCAGCAGGTTTGGACGCTGCAGCTCCCAGACACCCCGTGGCACTTGCAGGATCTTTTCATAGTTGCCCTAATAGCC

Function

NR:

description
PREDICTED: protein Wnt-8a isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132321 True 442 TUCP 0.59 2 17784163 17788050

Neighbor

gene id symbol gene type direction distance location
AMCG00011305 hnrnpab,LOC103028658,LOC106611940 coding upstream 22380 17757826 ~ 17761783 (+)
AMCG00011306 NA coding upstream 28405 17752774 ~ 17755758 (+)
AMCG00011310 gblp,LOC108268614,LOC107599381,LOC103033914,LOC108441034 coding upstream 33743 17745662 ~ 17750420 (+)
AMCG00011312 NA coding upstream 204447 17571125 ~ 17579716 (+)
AMCG00011308 LOC108441031 coding upstream 215935 17563585 ~ 17568228 (+)
AMCG00011324 gria1,LOC108427845 coding downstream 282351 18070401 ~ 18076037 (+)
AMCG00011320 gria2,LOC107575061,LOC108411138 coding downstream 304066 18092116 ~ 18098073 (+)
AMCG00011323 NA coding downstream 412591 18200641 ~ 18211863 (+)
AMCG00011321 cyfip2,LOC107561176,LOC107550751,LOC107752024,LOC107664348,LOC107744558 coding downstream 431996 18220046 ~ 18244145 (+)
AMCG00011322 NA coding downstream 457519 18245569 ~ 18252371 (+)
G105776 phykpl,LOC100691570 non-coding upstream 15942 17765891 ~ 17768221 (+)
G105769 NA non-coding upstream 32679 17751250 ~ 17751484 (+)
G105756 NA non-coding upstream 41776 17734990 ~ 17742387 (+)
G105715 NA non-coding upstream 405303 17378620 ~ 17378860 (+)
G105684 NA non-coding upstream 472095 17309759 ~ 17312068 (+)
G105792 NA non-coding downstream 211586 17999636 ~ 18000343 (+)
G105794 NA non-coding downstream 244705 18032755 ~ 18033025 (+)
G105811 NA non-coding downstream 387305 18175355 ~ 18247768 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 828800 18616850 ~ 18617065 (+)
G106022 NA non-coding downstream 1800143 19588193 ~ 19588973 (+)
AMCG00011293 plac8l1 other upstream 801922 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 1673782 16105586 ~ 16110381 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other upstream 1800084 15963340 ~ 15984079 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other upstream 1910674 15863032 ~ 15873489 (+)
AMCG00011252 NA other upstream 1928379 15853764 ~ 15855784 (+)
AMCG00011328 NA other downstream 1319223 19107273 ~ 19117369 (+)
G105916 NA other downstream 1434005 19222055 ~ 19222421 (+)
G106139 LOC108275110 other downstream 2307179 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 2507961 20296011 ~ 20339325 (+)
G106242 NA other downstream 2573158 20361208 ~ 20367223 (+)

Expression


Co-expression Network