G105794


Basic Information

Item Value
gene id G105794
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 18032755 ~ 18033025 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132340
ttttgttacctgcatgtattaccttgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctctgaatagcctgtgctgccaagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcattaatatagattagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132340 True 271 lncRNA 0.42 1 18032755 18033025

Neighbor

gene id symbol gene type direction distance location
AMCG00011305 hnrnpab,LOC103028658,LOC106611940 coding upstream 270972 17757826 ~ 17761783 (+)
AMCG00011306 NA coding upstream 276997 17752774 ~ 17755758 (+)
AMCG00011310 gblp,LOC108268614,LOC107599381,LOC103033914,LOC108441034 coding upstream 282335 17745662 ~ 17750420 (+)
AMCG00011312 NA coding upstream 453039 17571125 ~ 17579716 (+)
AMCG00011308 LOC108441031 coding upstream 464527 17563585 ~ 17568228 (+)
AMCG00011324 gria1,LOC108427845 coding downstream 37376 18070401 ~ 18076037 (+)
AMCG00011320 gria2,LOC107575061,LOC108411138 coding downstream 59091 18092116 ~ 18098073 (+)
AMCG00011323 NA coding downstream 167616 18200641 ~ 18211863 (+)
AMCG00011321 cyfip2,LOC107561176,LOC107550751,LOC107752024,LOC107664348,LOC107744558 coding downstream 187021 18220046 ~ 18244145 (+)
AMCG00011322 NA coding downstream 212544 18245569 ~ 18252371 (+)
G105792 NA non-coding upstream 32412 17999636 ~ 18000343 (+)
G105776 phykpl,LOC100691570 non-coding upstream 264534 17765891 ~ 17768221 (+)
G105769 NA non-coding upstream 281271 17751250 ~ 17751484 (+)
G105756 NA non-coding upstream 290368 17734990 ~ 17742387 (+)
G105715 NA non-coding upstream 653895 17378620 ~ 17378860 (+)
G105811 NA non-coding downstream 142330 18175355 ~ 18247768 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 583825 18616850 ~ 18617065 (+)
G106022 NA non-coding downstream 1555168 19588193 ~ 19588973 (+)
G106071 NA non-coding downstream 1770146 19803171 ~ 19803475 (+)
G106134 NA non-coding downstream 1923980 19957005 ~ 19995987 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 244705 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 1050514 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 1922374 16105586 ~ 16110381 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other upstream 2048676 15963340 ~ 15984079 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other upstream 2159266 15863032 ~ 15873489 (+)
AMCG00011328 NA other downstream 1074248 19107273 ~ 19117369 (+)
G105916 NA other downstream 1189030 19222055 ~ 19222421 (+)
G106139 LOC108275110 other downstream 2062204 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 2262986 20296011 ~ 20339325 (+)
G106242 NA other downstream 2328183 20361208 ~ 20367223 (+)

Expression


Co-expression Network