G105890


Basic Information

Item Value
gene id G105890
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19102293 ~ 19105269 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132457
CGGACATGGTGGGCTGTGAGGTGGGCGTTCAACTGCAGGGACTTGGAAAAAGAGACTCTACCTGATTTTCCAGCCAGTCAGCTCATCAGGAACATGGTCAAGGGCATGATGAGGCTGAGCCAAGATGACTACTTCAGTCGGGTTGGTGGCAATGGCAAGGAAATACAGagagttaaaaacaaacccctccctcttgctgtcagcttttctttttttgggcaAAACAAGCAGCTTAGCAGCCTAGAGAGCTACCTCTCTGAGAAGAGCAGCCCGATGTCCAGGTCCAATGATCCCCTGTCAACCCACAGCAGTTACTTGCAGGAACTCAAAGGCAGGGTCAAAGAGGCGTCAGACTGCTGGACGACCAAAGCTACAATCCAATGGTCCTGAGCACCCCTACTGTTCAGCAAAGCAATCTGAAGAGCAACCATGGTTGGTCACCATTGACTGTCCAATTATGTTGCTCTCATCAAAAATGAACCACCGCCCCTGTAAATAGTGACAGTTCATTGagtattcatttgtattttgttttagaattttctttttaaatgttataccACACATTTGataatttgttgtttgtttttctgtgttccAGGACCCC

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production
ko05310 Asthma

RNA

RNA id representative length rna type GC content exon number start site end site
TU132457 True 607 TUCP 0.46 2 19102293 19105269

Neighbor

gene id symbol gene type direction distance location
AMCG00011317 NA coding downstream 830089 18271412 ~ 18272204 (-)
AMCG00011318 med7,LOC107744582,LOC107669063,LOC107752091,LOC107664325,LOC107561400 coding downstream 905042 18196541 ~ 18197251 (-)
AMCG00011314 LOC107743918,LOC107752029,LOC107664328,LOC107568687,LOC107669111 coding downstream 1308787 17786920 ~ 17793506 (-)
AMCG00011315 LOC106604410,LOC107752029,LOC107743918,LOC107602558 coding downstream 1316451 17784040 ~ 17785842 (-)
AMCG00011311 NA coding downstream 1329128 17761910 ~ 17773165 (-)
AMCG00011330 NA coding upstream 11228 19116497 ~ 19121979 (-)
AMCG00011334 NA coding upstream 95227 19200496 ~ 19208029 (-)
AMCG00011333 NA coding upstream 104553 19209822 ~ 19217839 (-)
AMCG00011332 NA coding upstream 142355 19247624 ~ 19261952 (-)
AMCG00011336 LOC107715168,LOC103027224,LOC108430945,LOC108274535,LOC103354395 coding upstream 190815 19296084 ~ 19307708 (-)
G105859 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 485209 18616849 ~ 18617084 (-)
G105823 NA non-coding downstream 854523 18175668 ~ 18247770 (-)
G105840 NA non-coding downstream 858148 18240676 ~ 18244145 (-)
G105795 NA non-coding downstream 1069148 18032755 ~ 18033145 (-)
G105787 NA non-coding downstream 1104568 17997438 ~ 17997725 (-)
G105918 NA non-coding upstream 128453 19233722 ~ 19244483 (-)
G105967 ndst1,LOC106611870,LOC107094997 non-coding upstream 271244 19376513 ~ 19376908 (-)
G105968 NA non-coding upstream 291524 19396793 ~ 19480084 (-)
G106023 NA non-coding upstream 482906 19588175 ~ 19588972 (-)
G106163 NA non-coding upstream 835760 19941029 ~ 20014274 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 911098 18180646 ~ 18191195 (-)
G105793 NA other downstream 1101848 17999668 ~ 18000445 (-)
G105770 NA other downstream 1350791 17751253 ~ 17751502 (-)
AMCG00011313 NA other downstream 1351194 17717626 ~ 17751099 (-)
AMCG00011290 rbm27,LOC106567487 other downstream 2141224 16943932 ~ 16961069 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other upstream 305099 19410368 ~ 19413015 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other upstream 760345 19865614 ~ 19867902 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 3437380 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 3638161 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 3948044 23053313 ~ 23060966 (-)

Expression


Co-expression Network