G106022


Basic Information

Item Value
gene id G106022
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19588193 ~ 19588973 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132641
CTTCAATGTCTACTTTGTCAACAGTCCCTTTTTTGAGGGGCTAAAACATTGTCCAAGGGTGCTTTCTGTCCAGGTCTTGAACTGCTTTCCAGCTGCCTTGTGTGAGTAACAGTTTCCAATTAGCTCTCTTTGTAGAACTCTGGTAGATGCCTCAAATCTGCAGGGATGATTGTTGTAATCTGTTTAGCCCCTTGAGCCCATGAAAGAGGAGCCGggactttgtttatttattcaaatgaaagGACAGGGGCAGCCAGAGATAAAGCAGTAAAAGCTTCTTATTTCTAAAAAGATAAAGAGAATCCTGCTGCAGCAGCTTTCCAAGTTCAAAACATTAGACCAAATGATCAATGAAGATATATGTATACTTCTGctttttagtagtagtatacataTGTCACTACTACTTTCTATGAGTCATATTGTCAGagatgtcagtcagtcagcagtGAAAGTCCCTTTTAAGATATAATTCCCTCTTTGTTAAATCAGTTCTCTTTCTCGCAAAGTCGTGGAAACAAgcaccaaataaaaaacaaaatgttctgaGAGAATGCTTTGGTAAGCTTCAATGCCTCAAGTCCCAGAAAAAACAGCCTTCGAAAATGATTGAAATCTCTCCTCAGAAGTCAGTGAAAACGAACAGTCTCTGCATTTCCAAGGAacagaagaggaaaaacaaaaaaaccttaaaaacaaGAGCTTGATTCCTCTgtttaaaacaggaaaaagttAGGCTTTAATTCAAAAGGACTGCGAAAGGGTACGTTCCTCTCCCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132641 True 781 lncRNA 0.39 1 19588193 19588973

Neighbor

gene id symbol gene type direction distance location
AMCG00011347 NA coding upstream 88988 19485659 ~ 19499205 (+)
AMCG00011346 NA coding upstream 104047 19480738 ~ 19484146 (+)
AMCG00011339 LOC107748112,LOC107588766,LOC107590070 coding upstream 112317 19451015 ~ 19475876 (+)
AMCG00011342 NA coding upstream 149989 19434328 ~ 19438204 (+)
AMCG00011341 NA coding upstream 160636 19422459 ~ 19427557 (+)
AMCG00011351 NA coding downstream 12392 19601365 ~ 19609025 (+)
AMCG00011352 NA coding downstream 31009 19619982 ~ 19629426 (+)
AMCG00011353 ik,LOC107692978,LOC107661680 coding downstream 253200 19842173 ~ 19887630 (+)
AMCG00011358 LOC106603042,LOC107757604 coding downstream 300355 19889328 ~ 19898258 (+)
AMCG00011360 hars,LOC106611772 coding downstream 313188 19902161 ~ 19909593 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 971128 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1340425 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1555168 18032755 ~ 18033025 (+)
G105792 NA non-coding upstream 1587850 17999636 ~ 18000343 (+)
G105776 phykpl,LOC100691570 non-coding upstream 1819972 17765891 ~ 17768221 (+)
G106071 NA non-coding downstream 214198 19803171 ~ 19803475 (+)
G106134 NA non-coding downstream 368032 19957005 ~ 19995987 (+)
G106138 NA non-coding downstream 389274 19978247 ~ 20014348 (+)
G106277 NA non-coding downstream 1026465 20615438 ~ 20615641 (+)
G106298 NA non-coding downstream 1318477 20907450 ~ 20907653 (+)
G105916 NA other upstream 365772 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 470824 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 1800143 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2605952 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3477812 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 506256 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 707038 20296011 ~ 20339325 (+)
G106242 NA other downstream 772235 20361208 ~ 20367223 (+)
G106613 NA other downstream 3752335 23341308 ~ 23341765 (+)
G106618 NA other downstream 3767089 23356062 ~ 23356559 (+)

Expression


Co-expression Network