G106138


Basic Information

Item Value
gene id G106138
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19978247 ~ 20014348 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132783
ataatgcaccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcaacccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcactttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtacatatatatatatacacactcacctaaaggattattaggacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcatggcatggttgttggtgccagacgggccggtctgagtacttcacacattttcacacatttgtatatatatacactcacctaaaggattattaggaacaccatactaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132783 True 647 lncRNA 0.41 2 19978247 20014348

Neighbor

gene id symbol gene type direction distance location
AMCG00011363 NA coding upstream 20613 19956472 ~ 19957634 (+)
AMCG00011361 NA coding upstream 23160 19954620 ~ 19955087 (+)
AMCG00011359 NA coding upstream 59058 19914612 ~ 19919189 (+)
AMCG00011360 hars,LOC106611772 coding upstream 68654 19902161 ~ 19909593 (+)
AMCG00011358 LOC106603042,LOC107757604 coding upstream 79989 19889328 ~ 19898258 (+)
AMCG00011373 NA coding downstream 724034 20738382 ~ 20739024 (+)
AMCG00011374 NA coding downstream 940446 20954794 ~ 20958447 (+)
AMCG00011380 NA coding downstream 1112762 21127110 ~ 21131535 (+)
AMCG00011381 NA coding downstream 1212862 21227210 ~ 21236755 (+)
AMCG00011387 NA coding downstream 1305076 21319424 ~ 21385863 (+)
G106071 NA non-coding upstream 174772 19803171 ~ 19803475 (+)
G106022 NA non-coding upstream 389274 19588193 ~ 19588973 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 1361182 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1730479 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1945222 18032755 ~ 18033025 (+)
G106277 NA non-coding downstream 601090 20615438 ~ 20615641 (+)
G106298 NA non-coding downstream 893102 20907450 ~ 20907653 (+)
G106310 NA non-coding downstream 937874 20952222 ~ 20952712 (+)
G106327 NA non-coding downstream 1005862 21020210 ~ 21022119 (+)
G106347 NA non-coding downstream 1014445 21028793 ~ 21033188 (+)
G105916 NA other upstream 755826 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 860878 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 2190197 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2996006 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3867866 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 80881 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 281663 20296011 ~ 20339325 (+)
G106242 NA other downstream 346860 20361208 ~ 20367223 (+)
G106613 NA other downstream 3326960 23341308 ~ 23341765 (+)
G106618 NA other downstream 3341714 23356062 ~ 23356559 (+)

Expression


Co-expression Network