G106224


Basic Information

Item Value
gene id G106224
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20272063 ~ 20276305 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132920
CTCACCTCCACGGAAGACTCTGTGTTTTCTACCGGCATCTTGTCTTTCTCCACATGTCGCATCGTCTCTGAACCACTGGGGTCAACGTTCACAAGGTTTTGACTGACAGGTCTGATGTATCTGTATTCACTCTTCCCAGAATCTGTGGTCATGCACACCTCATAGTTATAGACGTGCTGTAGAGTTCCTGTAGCGCCAACGTCTGCGTAACGGGGCGGATAATACGCGCTGGGAATAACAGGGAGATTCCCATTGGATTTATAGAACAGACGAGACTGTCTCCATCTGCAGACCTTCACTGACACCAACACTATAACAGACACAATAAAGAGAAAGGACACCACAGCCAGAGACAAAACTAAATAGAAA

Function

NR:

description
uncharacterized protein LOC103046400

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132920 True 369 lncRNA 0.47 2 20272063 20276305

Neighbor

gene id symbol gene type direction distance location
AMCG00011362 NA coding downstream 359158 19909942 ~ 19912905 (-)
AMCG00011354 arsi,LOC106604849 coding downstream 447911 19817467 ~ 19824152 (-)
AMCG00011357 camk2a,LOC106563741,LOC106602935 coding downstream 513020 19730492 ~ 19759043 (-)
AMCG00011355 NA coding downstream 545698 19721154 ~ 19726365 (-)
AMCG00011350 LOC105888595 coding downstream 701735 19550227 ~ 19570328 (-)
AMCG00011366 diaph1 coding upstream 100637 20376942 ~ 20384649 (-)
AMCG00011367 NA coding upstream 109859 20386164 ~ 20390745 (-)
AMCG00011369 NA coding upstream 158153 20434458 ~ 20438919 (-)
AMCG00011368 NA coding upstream 164169 20440474 ~ 20477081 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding upstream 222817 20499122 ~ 20544751 (-)
G106212 NA non-coding downstream 54587 20217251 ~ 20217476 (-)
G106183 NA non-coding downstream 156195 20071482 ~ 20115868 (-)
G106163 NA non-coding downstream 257789 19941029 ~ 20014274 (-)
G106023 NA non-coding downstream 683091 19588175 ~ 19588972 (-)
G105968 NA non-coding downstream 791979 19396793 ~ 19480084 (-)
G106266 NA non-coding upstream 209966 20486271 ~ 20488188 (-)
G106278 NA non-coding upstream 339133 20615438 ~ 20615642 (-)
G106300 NA non-coding upstream 635614 20911919 ~ 20912138 (-)
G106340 NA non-coding upstream 675455 20951760 ~ 20952855 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 1519320 21795625 ~ 21799926 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 404161 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 859048 19410368 ~ 19413015 (-)
G105890 NA other downstream 1166794 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2080868 18180646 ~ 18191195 (-)
G105793 NA other downstream 2271618 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 2266344 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 2467125 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2777008 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 3116799 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 3537552 23813857 ~ 23817543 (-)

Expression


Co-expression Network