G106300


Basic Information

Item Value
gene id G106300
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20911919 ~ 20912138 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133011
GTAAAAACCCAaccttttaaattatgtatcttATGGATAAGATAGAAACATATATTTGTCTGTTCTTTTTCAGCTTTAGCCAGTTTCAAATTATTCTTGGGGATATTAACTTTAAAGAGATTAAGCACAAAAAACTGATTCTTGGGCCCATTTATttgatcacatttatttttttatttttctttatttttttgctaaTTTCCTTTGAGATGTCCAGCAa

Function

GO:

id name namespace
GO:0052547 regulation of peptidase activity biological_process
GO:0051336 regulation of hydrolase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133011 True 220 lncRNA 0.27 1 20911919 20912138

Neighbor

gene id symbol gene type direction distance location
AMCG00011375 NA coding downstream 4808 20892590 ~ 20907111 (-)
AMCG00011372 NA coding downstream 183778 20713938 ~ 20728141 (-)
AMCG00011371 spock1,LOC106604788,LOC106611816 coding downstream 251312 20645503 ~ 20660607 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding downstream 367168 20499122 ~ 20544751 (-)
AMCG00011368 NA coding downstream 434838 20440474 ~ 20477081 (-)
AMCG00011376 NA coding upstream 46726 20958864 ~ 20966129 (-)
AMCG00011379 NA coding upstream 64545 20976683 ~ 20977159 (-)
AMCG00011378 NA coding upstream 69271 20981409 ~ 20989043 (-)
AMCG00011377 NA coding upstream 82314 20994452 ~ 21007340 (-)
AMCG00011384 NA coding upstream 99733 21011871 ~ 21021937 (-)
G106278 NA non-coding downstream 296277 20615438 ~ 20615642 (-)
G106266 NA non-coding downstream 423731 20486271 ~ 20488188 (-)
G106224 NA non-coding downstream 635614 20272063 ~ 20276305 (-)
G106212 NA non-coding downstream 694443 20217251 ~ 20217476 (-)
G106183 NA non-coding downstream 796051 20071482 ~ 20115868 (-)
G106340 NA non-coding upstream 39622 20951760 ~ 20952855 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 883487 21795625 ~ 21799926 (-)
G106453 LOC103471465,LOC102309231,LOC102203450,LOC107738605 non-coding upstream 962674 21874812 ~ 21875126 (-)
G106454 NA non-coding upstream 1014715 21926853 ~ 21928367 (-)
G106509 NA non-coding upstream 1738362 22650500 ~ 22653658 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 1044017 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 1498904 19410368 ~ 19413015 (-)
G105890 NA other downstream 1806650 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2720724 18180646 ~ 18191195 (-)
G105793 NA other downstream 2911474 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 1630511 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 1831292 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2141175 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 2480966 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 2901719 23813857 ~ 23817543 (-)

Expression


Co-expression Network