G106361


Basic Information

Item Value
gene id G106361
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 21131698 ~ 21132430 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133087
TTTAGATAAACAAGGCCCTTTTTGTTGGCCAATAACTTTATTCAGTGTCAAGTACATCAACTTAAATCTATCAATAAAGGACAACAAATCCCCAATTCTATCAAAAGCTAAAAAGTATCATCAAAATCCTCATCTATctgaaacaaagagaaaagagaaggcTGTGGCATCTTCGGCGCAGGTGTCTTAATATGAATATTGGGGCATGCAAATGAAGGCCGAGGCTGCTGGCAAACTGGAGACCCAGAGGCTTCCGATTTCACTTCTGCGCCATCAGCAGTGCTTTCTAGCTCATCACAACCATGTATTCCTTTACAAAAAGCAAGGGATGATATATTTCTAATTGCAGTTTCAGTACGTTTTCTTAGGGAACCTGGTTTGCCTGGCACAGATGCGGTTTTACAGACCTTGTTTGCAAAGCTGGGCTCTTGGTCTTGAAcaatagaattaaaaacatacaatgaaTCCGGTACCTCATCCTGGGTGTTAATATTCTGCTTTCCATTCTGCTGCTGAAACCCAGTTCCTTCTGGTTCTTCCTCCTCCTTTGAGGATACAGAAAGAAACTTGTCCCATTTGGAAGCCTTCAGCCCAGGGTTCTGTGCACCGAATCTGGAATGCGATGAAGCTTTGGCAGCAGGAAAAGCTTGGCTGGTATTTGGAGCTGCGGTAGGTATGAGTGACGATCCCAAGGTTCTTGAATTTCTATTCGTCAATAGTGTCTCCCCATTCT

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU133087 True 733 lncRNA 0.43 1 21131698 21132430

Neighbor

gene id symbol gene type direction distance location
AMCG00011380 NA coding upstream 163 21127110 ~ 21131535 (+)
AMCG00011374 NA coding upstream 173251 20954794 ~ 20958447 (+)
AMCG00011373 NA coding upstream 392674 20738382 ~ 20739024 (+)
AMCG00011364 NA coding upstream 1135728 19987249 ~ 19995970 (+)
AMCG00011363 NA coding upstream 1174064 19956472 ~ 19957634 (+)
AMCG00011381 NA coding downstream 94780 21227210 ~ 21236755 (+)
AMCG00011387 NA coding downstream 186994 21319424 ~ 21385863 (+)
AMCG00011388 LOC105008787,LOC106604502 coding downstream 660098 21792528 ~ 21797963 (+)
AMCG00011390 pcdh1b,LOC107738605,LOC107740130,LOC107593598,LOC107680965,LOC106604502,LOC108438453,LOC107564069 coding downstream 736358 21868788 ~ 21876333 (+)
AMCG00011389 NA coding downstream 791529 21923959 ~ 21924258 (+)
G106347 NA non-coding upstream 98510 21028793 ~ 21033188 (+)
G106327 NA non-coding upstream 109579 21020210 ~ 21022119 (+)
G106310 NA non-coding upstream 178986 20952222 ~ 20952712 (+)
G106298 NA non-coding upstream 224045 20907450 ~ 20907653 (+)
G106277 NA non-coding upstream 516057 20615438 ~ 20615641 (+)
G106362 NA non-coding downstream 1825 21134255 ~ 21134613 (+)
G106391 NA non-coding downstream 83191 21215621 ~ 21241493 (+)
G106443 NA non-coding downstream 794469 21926899 ~ 21928577 (+)
G106455 NA non-coding downstream 800174 21932604 ~ 22062654 (+)
G106457 NA non-coding downstream 957627 22090057 ~ 22090265 (+)
G106242 NA other upstream 764475 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 792373 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 968732 20095229 ~ 20162966 (+)
G105916 NA other upstream 1909277 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 2014329 19107273 ~ 19117369 (+)
G106613 NA other downstream 2208878 23341308 ~ 23341765 (+)
G106618 NA other downstream 2223632 23356062 ~ 23356559 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 2616244 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 2703389 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 4475556 25607986 ~ 25662179 (+)

Expression


Co-expression Network