G106601


Basic Information

Item Value
gene id G106601
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23094291 ~ 23097328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133364
AATGCGGCGAAATTTCCAGTCCTGCTCCAAGACAGAGCTGgaaacagcacagtggagcaATTCCTCGGAGAGCTGAGGTGGTTCCTTCATCGTGGCAAAGGCATTTCTTCACAACATCAAGATGCTTCACTTTCACCAGAAAAAACTCTGCAAGGTGATCAATCACAAAAGTGACGGACATCACACACAAAGCAATTTCATGAACAATTAGTTCAGCTCAGTAGCTACTGCAGTCCTGTCAATATGCAGTTGACGGCAGAGACTGTGACTGCTTCCTCGCTCCACTGCGGCGCTCCAGAAATGAAGAATTAGCTGTCGATGACGAGTCCTGGGGCCTCTCCCTGATGCGGTCCTGGAACGGGCAGAGTTAATAGAAGGTTTTGGTGACTCTACATTGCGATCCTGTGGCGGCATAATGAATCTGCTCTCTCCTTTCCCAACCCCATTCTGTCATTTCTTCTGCACCCTTGTGAAATACACATCAAACTCTGCAATAAAGACTGTGTGCAGCCAGCATGGCAATGCTATTGGCAGAGCTATAATGGAGACAGAGATTTATGGCTGTGACCAGGTGTATGTTTGAGGGATTGTACCTGATCTAATAGCTTTTTGCCGAGCTGAATGAGAGGAGCTCTGAAGGTGAGTGGCAAAATGGCACTGACCTGTTATATGGCACTATCCCCTACTATATTATCGGCATCAAAGTGTATTTGcctcatttttattaaaacaaatgtgttgctCGTTTTTGTCGACTTTGTGCCTCAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133364 True 770 lncRNA 0.46 3 23094291 23097328

Neighbor

gene id symbol gene type direction distance location
AMCG00011408 cplx2,LOC108417825,LOC107598352,LOC108269257,LOC107571714,LOC107664715,LOC107741109 coding downstream 145281 22939740 ~ 22949010 (-)
AMCG00011401 NA coding downstream 304064 22780687 ~ 22790227 (-)
AMCG00011398 NA coding downstream 351216 22738678 ~ 22743075 (-)
AMCG00011400 NA coding downstream 399464 22694141 ~ 22694827 (-)
AMCG00011393 NA coding downstream 493508 22564099 ~ 22600783 (-)
AMCG00011412 g3bp1,LOC107567204,LOC107662011 coding upstream 243672 23341000 ~ 23345841 (-)
AMCG00011413 sparc,LOC105030028 coding upstream 253581 23350909 ~ 23361150 (-)
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding upstream 401498 23498826 ~ 23508364 (-)
AMCG00011421 NA coding upstream 421473 23518801 ~ 23561929 (-)
AMCG00011424 NA coding upstream 513401 23610729 ~ 23611511 (-)
G106587 NA non-coding downstream 231339 22862608 ~ 22862952 (-)
G106547 NA non-coding downstream 332975 22759534 ~ 22761316 (-)
G106527 NA non-coding downstream 397445 22696587 ~ 22696846 (-)
G106509 NA non-coding downstream 440633 22650500 ~ 22653658 (-)
G106454 NA non-coding downstream 1165924 21926853 ~ 21928367 (-)
G106603 NA non-coding upstream 79152 23176480 ~ 23176756 (-)
G106604 NA non-coding upstream 79529 23176857 ~ 23177129 (-)
G106606 NA non-coding upstream 79900 23177228 ~ 23177579 (-)
G106665 NA non-coding upstream 420050 23517378 ~ 23517803 (-)
G106682 NA non-coding upstream 493773 23591101 ~ 23591309 (-)
AMCG00011409 NA other downstream 33325 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 340675 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 540154 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3226389 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 3681276 19410368 ~ 19413015 (-)
AMCG00011414 NA other upstream 295776 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 716529 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 731969 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1914877 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2919848 26017176 ~ 26019400 (-)

Expression


Co-expression Network