G106606


Basic Information

Item Value
gene id G106606
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23177228 ~ 23177579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133370
TACATAATTGGTGCCCCGTGTGAGGAATCTTAGACTGAAAAGAACTAATTTCTGTAATAGTTATTGGATAGCTTTGTCCAGAAATCCAGATTCCAAAGTTTTGAAACAGGAAAACTTTTGTAGGCGTGATACACTGTTTGTACTCTAGAGGACGCTCTAGAACTGCCCACGTGGTATGTGTATGGTTTCCAAAGTCACAAAAGGTTAAGTCTGTTTTAGTTACTTGTGATAGATTGTTGATATCCTAAGCGTTGGCATTAGAGTCATTAGGTGATTAATCGAGTACTGTTCTGTTGGGTTGTTACTGAATATCCAAAACAATGATTACCCAAATGTCCCCATGTGAAGCATT

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133370 True 352 lncRNA 0.38 1 23177228 23177579

Neighbor

gene id symbol gene type direction distance location
AMCG00011408 cplx2,LOC108417825,LOC107598352,LOC108269257,LOC107571714,LOC107664715,LOC107741109 coding downstream 228218 22939740 ~ 22949010 (-)
AMCG00011401 NA coding downstream 387001 22780687 ~ 22790227 (-)
AMCG00011398 NA coding downstream 434153 22738678 ~ 22743075 (-)
AMCG00011400 NA coding downstream 482401 22694141 ~ 22694827 (-)
AMCG00011393 NA coding downstream 576445 22564099 ~ 22600783 (-)
AMCG00011412 g3bp1,LOC107567204,LOC107662011 coding upstream 163421 23341000 ~ 23345841 (-)
AMCG00011413 sparc,LOC105030028 coding upstream 173330 23350909 ~ 23361150 (-)
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding upstream 321247 23498826 ~ 23508364 (-)
AMCG00011421 NA coding upstream 341222 23518801 ~ 23561929 (-)
AMCG00011424 NA coding upstream 433150 23610729 ~ 23611511 (-)
G106604 NA non-coding downstream 99 23176857 ~ 23177129 (-)
G106603 NA non-coding downstream 472 23176480 ~ 23176756 (-)
G106601 NA non-coding downstream 79900 23094291 ~ 23097328 (-)
G106587 NA non-coding downstream 314276 22862608 ~ 22862952 (-)
G106547 NA non-coding downstream 415912 22759534 ~ 22761316 (-)
G106665 NA non-coding upstream 339799 23517378 ~ 23517803 (-)
G106682 NA non-coding upstream 413522 23591101 ~ 23591309 (-)
G106723 NA non-coding upstream 618101 23795680 ~ 23797219 (-)
G106817 NA non-coding upstream 1404377 24581956 ~ 24582174 (-)
G106862 NA non-coding upstream 1738585 24916164 ~ 24919197 (-)
AMCG00011409 NA other downstream 116262 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 423612 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 623091 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3309326 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 3764213 19410368 ~ 19413015 (-)
AMCG00011414 NA other upstream 215525 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 636278 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 651718 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1834626 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2839597 26017176 ~ 26019400 (-)

Expression


Co-expression Network