G106618


Basic Information

Item Value
gene id G106618
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23356062 ~ 23356559 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133383
CTCTCATAAAATCTAACGAGGATGATATCCCATCAAAGATGTCCTGCTAATGGATACTCACGCTCCTTGATGCCAAAGCAAGCAGCCCATTCCTCCAGGGCAATGTATTTGTCATTGTCAGCATCACACTGGGTGAAGAAGCGGGTTGTGCAGTGCTCCATGGGGATGAGAGGAGCACGCAGGGGGGCCAGCTCAGTGTGGGATAGATaCATCAATGGGGTGCTGGTCCAGCTGGCCGAACTGCCAGTGCACGGGGAAGATGTACATGTTGTAGTTCTTCTCAAAGTCATGGGCCAGCAGGTCCAGGGAGTGTTCACCAGCGTGGAGTCTCTTCTCATTTTCATAGATTTTCTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133383 True 357 TUCP 0.51 2 23356062 23356559

Neighbor

gene id symbol gene type direction distance location
AMCG00011411 glra1 coding upstream 34681 23288041 ~ 23321381 (+)
AMCG00011410 NA coding upstream 93224 23240188 ~ 23262838 (+)
AMCG00011403 thoc3,LOC102780803 coding upstream 516559 22835799 ~ 22839503 (+)
AMCG00011402 si:dkey-280e21.3,LOC107664720,LOC107662031 coding upstream 521235 22819761 ~ 22834827 (+)
AMCG00011407 NA coding upstream 557269 22798038 ~ 22798793 (+)
AMCG00011417 LOC106612256 coding downstream 47297 23403856 ~ 23415142 (+)
AMCG00011416 NA coding downstream 235984 23592543 ~ 23599212 (+)
AMCG00011419 NA coding downstream 266221 23622780 ~ 23623300 (+)
AMCG00011418 NA coding downstream 300111 23656670 ~ 23657442 (+)
AMCG00011420 NA coding downstream 306465 23663024 ~ 23677276 (+)
G106609 NA non-coding upstream 419 23353628 ~ 23355643 (+)
G106607 NA non-coding upstream 148585 23207246 ~ 23207477 (+)
G106588 NA non-coding upstream 420518 22929129 ~ 22935544 (+)
G106586 NA non-coding upstream 493110 22862608 ~ 22862952 (+)
G106513 NA non-coding upstream 661218 22692737 ~ 22694844 (+)
G106619 NA non-coding downstream 175 23356734 ~ 23361014 (+)
G106631 NA non-coding downstream 25723 23382282 ~ 23521931 (+)
G106640 fat2 non-coding downstream 182806 23539365 ~ 23540728 (+)
G106718 NA non-coding downstream 472730 23829289 ~ 23833300 (+)
G106742 NA non-coding downstream 584453 23941012 ~ 23971183 (+)
G106613 NA other upstream 14297 23341308 ~ 23341765 (+)
G106242 NA other upstream 2988839 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 3016737 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 3193096 20095229 ~ 20162966 (+)
G105916 NA other upstream 4133641 19222055 ~ 19222421 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 392115 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 479260 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 2251427 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 2999608 26356167 ~ 26360775 (+)
G107202 NA other downstream 3413879 26770438 ~ 26771214 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G129213 NA non-coding NC_048566.1 CM023220.2 27716943 ~ 27717270 (-)
tiger barb (Puntius tetrazona) G100756 NA non-coding NC_056712.1 CM032081.1 18546311 ~ 18547955 (-)