G106619


Basic Information

Item Value
gene id G106619
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23356734 ~ 23361014 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133385
TCACTCTGAGCTTCTGCTTCTCGGTGAGGAGGTTGTTCTCCTCATCGCGCTCGTACAGGGTGACCAGAACGTTCTTCAGCCAGTCCCTCATACGCAGAGGAAACTCGCTCAGCTCATTGTCCAGACAGGGAGCGATAATTTGCAGGGTCCGATGTAATCCAGGTGCAGCTTGTGTCCCTTCTTGGTGCCCTCCAAGGCGCACTTGGTGGCAAAGAAGTGGCAGGAGGAGTCATAGGTCTTGTTGTCGGTACCACAGAATGCTCAAACTCTCCCACGGAAGCGGGGCAGGTTGAGGGATCCTGGCAGACGCACATTGGGGTGTTGCTCTCATCGACCTCACACACCTTGCCCTTCTTGCAGTGGTGGTTGAGGCAAGGGTTCTCAGCAGCCACATCCTCAGTAATATCGATGGCCTCGTCGAATTCTCCGGTCTCCACCTGGACTGGGTTGGCGCCCACTTCCATCaccttagaaaaataaaaaaacaagttagcACCATGCCAAACAATGAGAAACCACTGGAAAAAATCTAATGGTACTAAGATATAATTTTAGTGTCTGCACTGTAATGTTATTGGCTTTAagattatattgtattttccaacatacatattcaatacAGTGAAGGACAGGGCACCTGAAAAGCTGGTTTACTGGaaagaataaaaccaaaaaattgTGAATGTCTTgatagattatatttgttttcatgttttgtgttaagcatatgtatgtatttatttattttcaatgttgtgTGTGGAACCACAAATTCATGCTTCCACAATGTTTGTTATAACATTTTAGACTGCATTTTGCTggtccttaaaaaaaaaaaaaggaaagaaaaacaactgtgaAAAATCCCTTTGGACTACTGAACAAACCAGAACAAATGCACACTTGCTAATATGAacacagctggaaaaaaaaaaaaatctttgtggGAAAGGAGCAAAAGTGCATGTGAATGAAGGGAGCAGTTTTACAGACTTAACCCATGAGGACAACGGAgagttttaaattacaaaaactgTTCAAATATTATTACCAAGCAAGTTTTCACAAAGGGATTATAAAATTATCTTATCCACCCACGTGCTGCTATTCAACTGTCTTGAGTGAATGTGCCGTTGGGACTACGCCAAAGCAGATGAGAACTTACTGGAGCAGCCATGGCCTTGCTGGCCAGGCAGAGGAGGAAGACAATCCACACCCGCATTTTCTGACTCAACCTGGAAAAGACAACAAAAGTCAGAATCCAACATTCGGTAGTCCACAACCAGTGCATTAATTTCATGCAAAAAACATGATTCtgtcacacaaaataaagtgcatCCACAGTTTCAGAGAATCCTCAACATACAATTGAGGTTATAGCTGCATAAACGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133385 True 1393 lncRNA 0.42 5 23356734 23361014

Neighbor

gene id symbol gene type direction distance location
AMCG00011411 glra1 coding upstream 35353 23288041 ~ 23321381 (+)
AMCG00011410 NA coding upstream 93896 23240188 ~ 23262838 (+)
AMCG00011403 thoc3,LOC102780803 coding upstream 517231 22835799 ~ 22839503 (+)
AMCG00011402 si:dkey-280e21.3,LOC107664720,LOC107662031 coding upstream 521907 22819761 ~ 22834827 (+)
AMCG00011407 NA coding upstream 557941 22798038 ~ 22798793 (+)
AMCG00011417 LOC106612256 coding downstream 42842 23403856 ~ 23415142 (+)
AMCG00011416 NA coding downstream 231529 23592543 ~ 23599212 (+)
AMCG00011419 NA coding downstream 261766 23622780 ~ 23623300 (+)
AMCG00011418 NA coding downstream 295656 23656670 ~ 23657442 (+)
AMCG00011420 NA coding downstream 302010 23663024 ~ 23677276 (+)
G106609 NA non-coding upstream 1091 23353628 ~ 23355643 (+)
G106607 NA non-coding upstream 149257 23207246 ~ 23207477 (+)
G106588 NA non-coding upstream 421190 22929129 ~ 22935544 (+)
G106586 NA non-coding upstream 493782 22862608 ~ 22862952 (+)
G106513 NA non-coding upstream 661890 22692737 ~ 22694844 (+)
G106631 NA non-coding downstream 21268 23382282 ~ 23521931 (+)
G106640 fat2 non-coding downstream 178351 23539365 ~ 23540728 (+)
G106718 NA non-coding downstream 468275 23829289 ~ 23833300 (+)
G106742 NA non-coding downstream 579998 23941012 ~ 23971183 (+)
G106863 NA non-coding downstream 1558837 24919851 ~ 24943678 (+)
G106618 NA other upstream 175 23356062 ~ 23356559 (+)
G106613 NA other upstream 14969 23341308 ~ 23341765 (+)
G106242 NA other upstream 2989511 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 3017409 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 3193768 20095229 ~ 20162966 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 387660 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 474805 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 2246972 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 2995153 26356167 ~ 26360775 (+)
G107202 NA other downstream 3409424 26770438 ~ 26771214 (+)

Expression


Co-expression Network