G106665


Basic Information

Item Value
gene id G106665
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23517378 ~ 23517803 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133432
NNNGCTTGATACTTAGAAGATGCACAGGGTTGGGGCAGCTGAATGATTTTCTGAGCAGTTCTGGCCTTTTATAAGCTTAATGAGGGTATATAGCAGGAAATGCAGGTGACAGTGGTTTGCAGTTTTTCCCTGTTATACAGCATACGAGAACATTTCCTGAACCAggtatcattatatatatatatatatatatatatatatatataattagtgaCTGTGCAGTGAGTTGTTCTGAATGTAACTtgtccaaaatgtatttgtataggTTTCCTctctcaaaaaaagaaaaggaaaaaaaaaaagatgtatcagataattgtaattgttttggtgttgtcttttttgttgtttgttaaaaaaataataataaaatcatgttttattttactacatGAAAGAATTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133432 True 406 lncRNA 0.30 2 23517378 23517803

Neighbor

gene id symbol gene type direction distance location
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding downstream 9014 23498826 ~ 23508364 (-)
AMCG00011413 sparc,LOC105030028 coding downstream 156228 23350909 ~ 23361150 (-)
AMCG00011412 g3bp1,LOC107567204,LOC107662011 coding downstream 171537 23341000 ~ 23345841 (-)
AMCG00011408 cplx2,LOC108417825,LOC107598352,LOC108269257,LOC107571714,LOC107664715,LOC107741109 coding downstream 568368 22939740 ~ 22949010 (-)
AMCG00011401 NA coding downstream 727151 22780687 ~ 22790227 (-)
AMCG00011421 NA coding upstream 998 23518801 ~ 23561929 (-)
AMCG00011424 NA coding upstream 92926 23610729 ~ 23611511 (-)
AMCG00011423 NA coding upstream 220973 23738776 ~ 23741793 (-)
AMCG00011422 NA coding upstream 225275 23743078 ~ 23749052 (-)
AMCG00011431 tspan17,LOC107680656,LOC107749748,LOC107594893,LOC107653321,LOC106612270 coding upstream 448316 23966119 ~ 23979763 (-)
G106606 NA non-coding downstream 339799 23177228 ~ 23177579 (-)
G106604 NA non-coding downstream 340249 23176857 ~ 23177129 (-)
G106603 NA non-coding downstream 340622 23176480 ~ 23176756 (-)
G106601 NA non-coding downstream 420050 23094291 ~ 23097328 (-)
G106587 NA non-coding downstream 654426 22862608 ~ 22862952 (-)
G106682 NA non-coding upstream 73298 23591101 ~ 23591309 (-)
G106723 NA non-coding upstream 277877 23795680 ~ 23797219 (-)
G106817 NA non-coding upstream 1064153 24581956 ~ 24582174 (-)
G106862 NA non-coding upstream 1398361 24916164 ~ 24919197 (-)
G106885 NA non-coding upstream 1469002 24986805 ~ 24991176 (-)
AMCG00011414 NA other downstream 27736 23393104 ~ 23489642 (-)
AMCG00011409 NA other downstream 456412 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 763762 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 963241 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3649476 19865614 ~ 19867902 (-)
AMCG00011428 NA other upstream 296054 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 311494 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1494402 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2499373 26017176 ~ 26019400 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 2989140 26506943 ~ 26516507 (-)

Expression


Co-expression Network