G106682


Basic Information

Item Value
gene id G106682
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23591101 ~ 23591309 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133456
AGTAATTCAGAATCTGTTTATGCTGTTTCGCTTACTGTTGATAGAAATGTGTAAACTGGTTCATTTTCTCCTGTCTGTCTCTTCCCTGGTGTTTATCTGTTCCTCTTTAGAGAAATGTCAAAAACGTACATCATGAGTACTAATTACCAGAGAACAGTTTGAACACAgtgttttgttccaaccaagcctCCTATGTGTTGTCGGCAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133456 True 209 lncRNA 0.39 1 23591101 23591309

Neighbor

gene id symbol gene type direction distance location
AMCG00011421 NA coding downstream 29172 23518801 ~ 23561929 (-)
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding downstream 82737 23498826 ~ 23508364 (-)
AMCG00011413 sparc,LOC105030028 coding downstream 229951 23350909 ~ 23361150 (-)
AMCG00011412 g3bp1,LOC107567204,LOC107662011 coding downstream 245260 23341000 ~ 23345841 (-)
AMCG00011408 cplx2,LOC108417825,LOC107598352,LOC108269257,LOC107571714,LOC107664715,LOC107741109 coding downstream 642091 22939740 ~ 22949010 (-)
AMCG00011424 NA coding upstream 19420 23610729 ~ 23611511 (-)
AMCG00011423 NA coding upstream 147467 23738776 ~ 23741793 (-)
AMCG00011422 NA coding upstream 151769 23743078 ~ 23749052 (-)
AMCG00011431 tspan17,LOC107680656,LOC107749748,LOC107594893,LOC107653321,LOC106612270 coding upstream 374810 23966119 ~ 23979763 (-)
AMCG00011432 NA coding upstream 402829 23994138 ~ 24000458 (-)
G106665 NA non-coding downstream 73298 23517378 ~ 23517803 (-)
G106606 NA non-coding downstream 413522 23177228 ~ 23177579 (-)
G106604 NA non-coding downstream 413972 23176857 ~ 23177129 (-)
G106603 NA non-coding downstream 414345 23176480 ~ 23176756 (-)
G106601 NA non-coding downstream 493773 23094291 ~ 23097328 (-)
G106723 NA non-coding upstream 204371 23795680 ~ 23797219 (-)
G106817 NA non-coding upstream 990647 24581956 ~ 24582174 (-)
G106862 NA non-coding upstream 1324855 24916164 ~ 24919197 (-)
G106885 NA non-coding upstream 1395496 24986805 ~ 24991176 (-)
G107035 neurl1b non-coding upstream 2414670 26005979 ~ 26006456 (-)
AMCG00011414 NA other downstream 101459 23393104 ~ 23489642 (-)
AMCG00011409 NA other downstream 530135 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 837485 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 1036964 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3723199 19865614 ~ 19867902 (-)
AMCG00011428 NA other upstream 222548 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 237988 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1420896 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2425867 26017176 ~ 26019400 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 2915634 26506943 ~ 26516507 (-)

Expression


Co-expression Network