G106723


Basic Information

Item Value
gene id G106723
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23795680 ~ 23797219 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133511
TCTACATTCATCTCGCCTCAACATCTACAAGTGTCAGACCCTCGTGCAAAGCTGATGTTTCccttgtgtgtgactgtgctgaTTACGGTGTTGACAGACCTTGGGTTTGTTTTGGAATGCCAATGCCCAGACTTGAATTAAAGCTGGATGAGGATCTCAGGACCTCGTTGTCTCTCACTAGCTCTTCCACTCGTTGACGTAATTTTGATGCCTCCGTCTGGGATTCTTCTAGCAGGTCCCCTAAGCTCTTGAGACCCTTCATCCGCTCCCTCAGAATGCAGTTCTCTTCCAGTAGTTGTTTGTAGGCCAAACTGCTTGCTTCTTCCTTCTGCTCACTCCCACCCGGGTCATAAATTCGATAGGGCCCTTTCCCCTCCATTGGTAGCACTTTACTTACAAAACATACTGCTGCAGGGTCTTACACTGacagggagggaaaaaagaa

Function

GO:

id name namespace
GO:0007369 gastrulation biological_process
GO:0060026 convergent extension biological_process
GO:0060027 convergent extension involved in gastrulation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133511 True 445 lncRNA 0.48 2 23795680 23797219

Neighbor

gene id symbol gene type direction distance location
AMCG00011422 NA coding downstream 46628 23743078 ~ 23749052 (-)
AMCG00011423 NA coding downstream 53887 23738776 ~ 23741793 (-)
AMCG00011424 NA coding downstream 184169 23610729 ~ 23611511 (-)
AMCG00011421 NA coding downstream 233751 23518801 ~ 23561929 (-)
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding downstream 287316 23498826 ~ 23508364 (-)
AMCG00011431 tspan17,LOC107680656,LOC107749748,LOC107594893,LOC107653321,LOC106612270 coding upstream 168900 23966119 ~ 23979763 (-)
AMCG00011432 NA coding upstream 196919 23994138 ~ 24000458 (-)
AMCG00011433 NA coding upstream 292053 24089272 ~ 24102925 (-)
AMCG00011436 lrrtm2,LOC107750357 coding upstream 405536 24202755 ~ 24204323 (-)
AMCG00011442 NA coding upstream 1117997 24915216 ~ 24957646 (-)
G106682 NA non-coding downstream 204371 23591101 ~ 23591309 (-)
G106665 NA non-coding downstream 277877 23517378 ~ 23517803 (-)
G106606 NA non-coding downstream 618101 23177228 ~ 23177579 (-)
G106604 NA non-coding downstream 618551 23176857 ~ 23177129 (-)
G106603 NA non-coding downstream 618924 23176480 ~ 23176756 (-)
G106817 NA non-coding upstream 784737 24581956 ~ 24582174 (-)
G106862 NA non-coding upstream 1118945 24916164 ~ 24919197 (-)
G106885 NA non-coding upstream 1189586 24986805 ~ 24991176 (-)
G107035 neurl1b non-coding upstream 2208760 26005979 ~ 26006456 (-)
G107037 NA non-coding upstream 2212301 26009520 ~ 26012447 (-)
AMCG00011414 NA other downstream 306038 23393104 ~ 23489642 (-)
AMCG00011409 NA other downstream 734714 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 1042064 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 1241543 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3927778 19865614 ~ 19867902 (-)
AMCG00011428 NA other upstream 16638 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 32078 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1214986 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2219957 26017176 ~ 26019400 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 2709724 26506943 ~ 26516507 (-)

Expression


Co-expression Network