G106863


Basic Information

Item Value
gene id G106863
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 24919851 ~ 24943678 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133666
tattttcaagtgattttattaataaggACAATAAATGCACACTGATCTCATTCTCACAGAAATTGAACCATAAGATtaagacaaataattaaaatacaatagcagaagaaaaaaaatatctaaaaaaacaaaccaaaccaaaagaaagaaaaaaaaggattgcaCTTAACATACATTCATCAAGATATGCCAGGATTCCATTTAATCCattctgtatttgtctttttaacacatttctcaATTAACACATAGCAGCCAATGCTAGTAATAGGCGGGACTATCATACAATGCCTAGTCTAGTTTATCTAAAACGAAAAAGCAATAATCCCTGAGGTTTAAATGTCCACGTGCCCTTCCTTTGTGACCATCGGCAGCACTCCCAGTGCTTCCCTTCATCACAACACATTTGAAAGCTGAATTCCTAATATATTCCCTTAATTCAGTGCACAAAAGTCTGTAATCGCTCCTACGTGGATCTCAAAATCTATCAAGTCCCCTGTTGATTTGTACAGTCCATATTCCTTCTAACTCAGATTTGTTTGCCACGCAATTCTGCAGAACATACATGTATATCCATGAACATAATAAGTATAAATCCCTTTCCCAATTAATAAACAAGAGGTTTGGGAATTGAGTACCCCCCTCCTCTCATCCTACTATACAAGGTTTGTTAGGATAGAAAAATAACAGTTTGTTgctaatgtttatatataagattaaaacatatatatatatatataaatatatagatagatatatgtat

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU133666 True 763 lncRNA 0.33 2 24919851 24943678

Neighbor

gene id symbol gene type direction distance location
AMCG00011441 NA coding upstream 2911 24915075 ~ 24916940 (+)
AMCG00011438 NA coding upstream 33090 24881356 ~ 24886761 (+)
AMCG00011439 NA coding upstream 95822 24817579 ~ 24824029 (+)
AMCG00011437 NA coding upstream 111027 24793372 ~ 24808824 (+)
AMCG00011435 ctnna1,LOC107594945,LOC107750356 coding upstream 677610 24209990 ~ 24242241 (+)
AMCG00011440 rnf44 coding downstream 27869 24971547 ~ 24986723 (+)
AMCG00011443 cltb coding downstream 59986 25003664 ~ 25014869 (+)
AMCG00011444 prelid1 coding downstream 100527 25044205 ~ 25047214 (+)
AMCG00011450 NA coding downstream 128059 25071737 ~ 25093488 (+)
AMCG00011451 ddx41 coding downstream 150851 25094529 ~ 25105105 (+)
G106742 NA non-coding upstream 948668 23941012 ~ 23971183 (+)
G106718 NA non-coding upstream 1086551 23829289 ~ 23833300 (+)
G106640 fat2 non-coding upstream 1379123 23539365 ~ 23540728 (+)
G106631 NA non-coding upstream 1397920 23382282 ~ 23521931 (+)
G106619 NA non-coding upstream 1558837 23356734 ~ 23361014 (+)
G106874 NA non-coding downstream 43160 24986838 ~ 24991237 (+)
G106906 NA non-coding downstream 103846 25047524 ~ 25049147 (+)
G106946 NA non-coding downstream 393874 25337552 ~ 25337767 (+)
G106947 NA non-coding downstream 427801 25371479 ~ 25371745 (+)
G106961 NA non-coding downstream 722446 25666124 ~ 25667782 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 1074940 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 1166849 23748674 ~ 23753002 (+)
G106618 NA other upstream 1563292 23356062 ~ 23356559 (+)
G106613 NA other upstream 1578086 23341308 ~ 23341765 (+)
G106242 NA other upstream 4552628 20361208 ~ 20367223 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 664308 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 1412489 26356167 ~ 26360775 (+)
G107202 NA other downstream 1826760 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 1874374 26818052 ~ 26842792 (+)
G107394 NA other downstream 2768528 27712206 ~ 27727867 (+)

Expression


Co-expression Network