G106871


Basic Information

Item Value
gene id G106871
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 24939022 ~ 24940823 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133676
agaatacACCTGTAGGCACTGTTCTGTTTACAGTGTCAGCCACAGATAAAGACCAACAATTAGCAGCTGTTGTAAATTACAGTATTGAGCAGGTTGTCCCAAATGACCCCGATCTTTTTGAAATTGCAAGAACCGGCGAGGTTCGACTAACTGCACCTTTCAACTACACTAGCAAAAGCACTTTCTATCAACTAAAGATCACTGCAAAAgATGGTGGTGGGCAGCTGGATGGGGAAGAAGTTTTTCAGAACTCCTCTACATTTGCCTTCATTGCAGTTGTTGACGTCCCTGATATTGATCCACAATTTCTAAATGTAGTTTTTCAGACCTCGGTTAATGAACATGCTGCTGTTgACACTTCTGTGTTTCATGTGAAAGCCATTGATGGTGACAGAGGAATCAATGACAACATCATTTTTAGCATTCAGA

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU133676 True 429 lncRNA 0.41 4 24939022 24940823

Neighbor

gene id symbol gene type direction distance location
AMCG00011441 NA coding upstream 22082 24915075 ~ 24916940 (+)
AMCG00011438 NA coding upstream 52261 24881356 ~ 24886761 (+)
AMCG00011439 NA coding upstream 114993 24817579 ~ 24824029 (+)
AMCG00011437 NA coding upstream 130198 24793372 ~ 24808824 (+)
AMCG00011435 ctnna1,LOC107594945,LOC107750356 coding upstream 696781 24209990 ~ 24242241 (+)
AMCG00011440 rnf44 coding downstream 30724 24971547 ~ 24986723 (+)
AMCG00011443 cltb coding downstream 62841 25003664 ~ 25014869 (+)
AMCG00011444 prelid1 coding downstream 103382 25044205 ~ 25047214 (+)
AMCG00011450 NA coding downstream 130914 25071737 ~ 25093488 (+)
AMCG00011451 ddx41 coding downstream 153706 25094529 ~ 25105105 (+)
G106742 NA non-coding upstream 967839 23941012 ~ 23971183 (+)
G106718 NA non-coding upstream 1105722 23829289 ~ 23833300 (+)
G106640 fat2 non-coding upstream 1398294 23539365 ~ 23540728 (+)
G106631 NA non-coding upstream 1417091 23382282 ~ 23521931 (+)
G106619 NA non-coding upstream 1578008 23356734 ~ 23361014 (+)
G106874 NA non-coding downstream 46015 24986838 ~ 24991237 (+)
G106906 NA non-coding downstream 106701 25047524 ~ 25049147 (+)
G106946 NA non-coding downstream 396729 25337552 ~ 25337767 (+)
G106947 NA non-coding downstream 430656 25371479 ~ 25371745 (+)
G106961 NA non-coding downstream 725301 25666124 ~ 25667782 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 1094111 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 1186020 23748674 ~ 23753002 (+)
G106618 NA other upstream 1582463 23356062 ~ 23356559 (+)
G106613 NA other upstream 1597257 23341308 ~ 23341765 (+)
G106242 NA other upstream 4571799 20361208 ~ 20367223 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 667163 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 1415344 26356167 ~ 26360775 (+)
G107202 NA other downstream 1829615 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 1877229 26818052 ~ 26842792 (+)
G107394 NA other downstream 2771383 27712206 ~ 27727867 (+)

Expression


Co-expression Network