G107202


Basic Information

Item Value
gene id G107202
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26770438 ~ 26771214 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134100
AGGAGTGCATGACTTTAAGTCGCTCCTTCCACAAGCATGAGAGCACAGGGGGCCACAGGCCTGGAGTTAAGCTTTGTGCGACTCTCCCTGTGAAGACAGCTGCCAGCAGCACCACGGCCAGACCAAGACCGACTGCAATCCAGAAACATCCAGTGAGGACTAGTCAGTACAGGTTTCCTAAAGAAACACAGGCAGAGCGCAGAGCAAAGCTGGACAAAATGGTTGACATCAAAAGGCAAGACCCCGAAAAGGCCGTCAATGATAGTGTCTCCCCATGccagagaggcagggaggagagCCTGAGAGAGGAGTGGGAGAGAAAAACTACTGGACTTCGGCTTGAAGTTGACAT

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134100 True 352 TUCP 0.53 2 26770438 26771214

Neighbor

gene id symbol gene type direction distance location
AMCG00011477 klhl3,LOC106604937,LOC106611969 coding upstream 334980 26413301 ~ 26435458 (+)
AMCG00011478 NA coding upstream 361065 26401965 ~ 26409373 (+)
AMCG00011483 hnrnpa0,roa0,LOC107598338,LOC105905838,LOC107567479 coding upstream 372456 26388294 ~ 26397982 (+)
AMCG00011472 fbxo38 coding upstream 505911 26245927 ~ 26264527 (+)
AMCG00011471 fgfrl1b,LOC107740189,LOC107593239 coding upstream 528411 26240373 ~ 26242027 (+)
AMCG00011491 LOC101077011,LOC100136477 coding downstream 139137 26910351 ~ 26923941 (+)
AMCG00011490 NA coding downstream 186928 26958142 ~ 26969283 (+)
AMCG00011493 NA coding downstream 287778 27058992 ~ 27067377 (+)
AMCG00011494 htr4,LOC108269380 coding downstream 417337 27188551 ~ 27195648 (+)
AMCG00011495 lman2 coding downstream 500384 27271598 ~ 27279308 (+)
G107128 NA non-coding upstream 318863 26447202 ~ 26451575 (+)
G107126 NA non-coding upstream 382454 26387748 ~ 26387984 (+)
G107098 NA non-coding upstream 477991 26277374 ~ 26292447 (+)
G107084 NA non-coding upstream 567819 26199950 ~ 26202619 (+)
G107004 ergic1 non-coding upstream 881600 25882692 ~ 25888838 (+)
G107321 NA non-coding downstream 696190 27467404 ~ 27468567 (+)
G107331 NA non-coding downstream 726113 27497327 ~ 27501442 (+)
G107382 NA non-coding downstream 842747 27613961 ~ 27615738 (+)
G107402 NA non-coding downstream 1019652 27790866 ~ 27874138 (+)
G107408 NA non-coding downstream 1111881 27883095 ~ 27883396 (+)
AMCG00011476 NA other upstream 409663 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 1108259 25607986 ~ 25662179 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 2925527 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 3017436 23748674 ~ 23753002 (+)
G106618 NA other upstream 3413879 23356062 ~ 23356559 (+)
AMCG00011488 NA other downstream 46838 26818052 ~ 26842792 (+)
G107394 NA other downstream 940992 27712206 ~ 27727867 (+)
AMCG00011519 NA other downstream 2097928 28869142 ~ 28876355 (+)
G107741 NA other downstream 2926387 29697601 ~ 29699419 (+)
G107784 NA other downstream 3086756 29857970 ~ 29875476 (+)

Expression


Co-expression Network