G107237


Basic Information

Item Value
gene id G107237
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26910515 ~ 26910758 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134137
CCCGAAAAGCTCGGGGTCTCCTGTGCTGTACTGGTTGGAGGCAGGGGAGGTGTCTGAGTGGTCGTTGCACCATTGCAGCTCGCTGAGGCAGTTGACAGAATCGAAATCGCTGGCGTCCAGCTGAGACAAGTCGATGTCTGGAAAGTCAGTGTCCAGCCGGTCAGAGCAGACTTCCTCCTCCTCGTACTGTAATACAcatgggaagagagagagagagagagagagagagagagagagagagaga

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU134137 True 244 lncRNA 0.55 1 26910515 26910758

Neighbor

gene id symbol gene type direction distance location
AMCG00011489 NA coding downstream 92157 26804882 ~ 26818358 (-)
AMCG00011487 slit3,LOC106604933,LOC106611921 coding downstream 178835 26688414 ~ 26731680 (-)
AMCG00011486 LOC106604933 coding downstream 268549 26571172 ~ 26641966 (-)
AMCG00011484 LOC107598335,LOC107741069,LOC107664724,LOC107567475 coding downstream 420042 26446580 ~ 26490473 (-)
AMCG00011479 NA coding downstream 533136 26370173 ~ 26377379 (-)
AMCG00011492 pde6a,LOC107662021,LOC107756707,LOC107601194 coding upstream 20628 26931386 ~ 26943383 (-)
AMCG00011501 NA coding upstream 504430 27415188 ~ 27423491 (-)
AMCG00011503 NA coding upstream 586551 27497309 ~ 27529953 (-)
AMCG00011506 sp30l,sap30l,LOC106603970,LOC105890504 coding upstream 687356 27598114 ~ 27606988 (-)
AMCG00011507 galnt10,LOC103022003,LOC100711410,LOC102207837,LOC102305690 coding upstream 709751 27620509 ~ 27639480 (-)
G107233 NA non-coding downstream 67729 26838167 ~ 26842786 (-)
G107232 NA non-coding downstream 76665 26833565 ~ 26833850 (-)
G107167 hnrnpa0,LOC105905838,LOC107664751,LOC107567479,LOC107598338,LOC107756703,LOC107741073 non-coding downstream 501140 26388212 ~ 26409375 (-)
G107166 NA non-coding downstream 580906 26311843 ~ 26329609 (-)
G107082 hspa9 non-coding downstream 712682 26196112 ~ 26197833 (-)
G107238 NA non-coding upstream 1250 26912008 ~ 26912220 (-)
G107241 NA non-coding upstream 4754 26915512 ~ 26915968 (-)
G107275 NA non-coding upstream 161729 27072487 ~ 27072708 (-)
G107289 NA non-coding upstream 336206 27246964 ~ 27247180 (-)
G107290 b4galt7,LOC106612238 non-coding upstream 336981 27247739 ~ 27292313 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 394008 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 891115 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 1892183 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 3075441 23829297 ~ 23835074 (-)
AMCG00011428 NA other downstream 3092972 23813857 ~ 23817543 (-)
G107713 NA other upstream 2714326 29625084 ~ 29625387 (-)
AMCG00011536 NA other upstream 2975458 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 3280815 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 5219736 32130494 ~ 32205554 (-)

Expression


Co-expression Network