G107382


Basic Information

Item Value
gene id G107382
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 27613961 ~ 27615738 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134298
attcCAGTTTAGTTGAACAGTTGTTAAatatctaaatacattttttcccccagtcaTCATGTCTAAAAgtcagtacaaaaaaaaatattggatATTTATGAGatacaaaatgtacactttAATTCCCTAAACATCAAAATTACACATACTGAATGATACCTAcctaaaaatgttaaaaactcAAATATTACTCCCACGTTGTAGCTGAACAGTATGTCAATTATGAAATTCATATCAAATGATTTGAATAGTATAAATCGTTCTCTTGTaactataaaaatattaattgtattagcCTCCCTCCcaatgtttttcatattttgaataaaactTGATTAAATACAGTGCACTTACACTTGACCAGTAGTTACAGAACAGAATACAGTTTCTAtactgtataaaaatacaaGCATTTACACTCACTATATTTCATGATGAAGTTGAGGTGTTAATGTGAAGTTAATAAAATTATACTATTTAGAACAAGGAGAAAAGTGTAGGGAAAAGTGTAATATTCTTAAGGACAATTTTTCttcataatgaaaaaatactgaAAGGAAAGAACCTTAAAATCAACTCATAATTTGTGTGCTGGAAATATTCAGCCTTATCTTGAATAAAGTGCCAAACTTGGTACACATTGCTACTGAATCACATTCATTCTTATCTCAAATCGTATGccattaactttatttatttaaagaagcTTAATCAATGAAATATGATCTTTGGAAACTTGTAAGAAATCATAATCAAAGAACAAAAGATACAAACATCACAGCTGAAGTAaacctcaaaaacaaaattattagtAGTGCTATTTGTtagtacatagttaatttatccCAAATCAAAGATATACAATGACATTTGGAAAGTCATTTGATATATTACTGGTCATTGTTGTTCAATTAGTCCTGGACATTCCGTTCCAATATCATGTCTGATCTGTATAGATTTAATAAAATCCACATTCCACGATCAAataaggggaaaataaatataataatgtattagatAAAGTAAAAGGACTGACTATTCCCATTTTTGAGTAACCATATGacatcagaaaaaaactaaaattaaaatacaactcatgatttaaacacacaaactacatatatacatataaaagaaTATCCAAAATGAAGACTTATTAAAGAATTAAGGACACAATGACCATTGTACACTAGAATTCAGTGATCAGATCAATTCTGagaaaatttaaaacaaacaaaataatctttGGTTTTATCTTATATTTCGGGGTTTTACCTTTTTAACAGTTACACGTATTTAGAATgtggttaaaaagaaaaaacaaaaacaaattaatctgttcATATTGCTGTGGATTATTAAATCTTAAATTTATTAGATTCTCTCCCTACAAGCAAAATGATTTGTCTTTTTACTTCTATATCTTAACTGAATTGGTAACTGGAAGCATTAAaggtttcttattttattcttagAATGCCCTTGTTCCAGTGAAGGCTACCCATAATTCCACAGTTCTGCTGATTGGCCATGAACCCACAGTATGGCTTGGCAGTGCATGGTTGACAACTGGCAGTTCTGGATTGGCCAGGCTTAAATAAGTCATCACTGGTGAAAACCTAGACCAaagcaaaactttgacctacccacgaATAACTTATGACACCTCCCCCTataagggttgcctggggaaggagacggaggctcacATCTTTAGAGAGTGTCCCTCCGCCtacagggtctggctcctgttttctccgttcctccacaggtttNNN

Function

NR:

description
PREDICTED: MOB kinase activator 2-like

GO:

id name namespace
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009124 nucleoside monophosphate biosynthetic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0009127 purine nucleoside monophosphate biosynthetic process biological_process
GO:0009156 ribonucleoside monophosphate biosynthetic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134298 True 1778 lncRNA 0.31 1 27613961 27615738

Neighbor

gene id symbol gene type direction distance location
AMCG00011504 hand1,LOC106603969 coding upstream 18957 27591655 ~ 27595004 (+)
AMCG00011505 NA coding upstream 30158 27556300 ~ 27583803 (+)
AMCG00011502 NA coding upstream 117318 27484188 ~ 27496643 (+)
AMCG00011500 rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 131971 27472631 ~ 27481990 (+)
AMCG00011499 emx3,LOC107664735,LOC107563604,LOC108416560,LOC107598366 coding upstream 290016 27321672 ~ 27323945 (+)
AMCG00011510 NA coding downstream 279778 27895516 ~ 27906851 (+)
AMCG00011511 LOC100196276 coding downstream 292654 27908392 ~ 27915999 (+)
AMCG00011512 mrpl22 coding downstream 336561 27952299 ~ 27958923 (+)
AMCG00011516 NA coding downstream 932765 28548503 ~ 28556689 (+)
AMCG00011513 NA coding downstream 955884 28571622 ~ 28574341 (+)
G107331 NA non-coding upstream 112519 27497327 ~ 27501442 (+)
G107321 NA non-coding upstream 145394 27467404 ~ 27468567 (+)
G107128 NA non-coding upstream 1162386 26447202 ~ 26451575 (+)
G107126 NA non-coding upstream 1225977 26387748 ~ 26387984 (+)
G107098 NA non-coding upstream 1321514 26277374 ~ 26292447 (+)
G107402 NA non-coding downstream 175128 27790866 ~ 27874138 (+)
G107408 NA non-coding downstream 267357 27883095 ~ 27883396 (+)
G107450 NA non-coding downstream 672412 28288150 ~ 28288391 (+)
G107502 NA non-coding downstream 1050428 28666166 ~ 28666386 (+)
G107513 NA non-coding downstream 1098385 28714123 ~ 28714489 (+)
AMCG00011488 NA other upstream 771169 26818052 ~ 26842792 (+)
G107202 NA other upstream 842747 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 1253186 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 1951782 25607986 ~ 25662179 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 3769050 23835819 ~ 23844911 (+)
G107394 NA other downstream 96468 27712206 ~ 27727867 (+)
AMCG00011519 NA other downstream 1253404 28869142 ~ 28876355 (+)
G107741 NA other downstream 2081863 29697601 ~ 29699419 (+)
G107784 NA other downstream 2242232 29857970 ~ 29875476 (+)
G107858 NA other downstream 2556050 30171788 ~ 30212090 (+)

Expression


Co-expression Network