G107513


Basic Information

Item Value
gene id G107513
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 28714123 ~ 28714489 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134459
GGAGTGCACACCTGAGGAGACTGTGGTTATTGGGGGGGGATTTTAATTGTACAGTTGATCCTCTGAAGGATAGGAATCATTTAGAACCTCATCCTCAGTCCAGCAAAGAGCTTTTAAGGATTATTAAACGTTTTCAATTGGCTGATGTTTGGAAAGTTTTTAACAACACCAGACAGTATACGTGGACGAAGATCACAGAGAAGGATGTCTCTCTGGCTAGATTGGATCGCTTTTATACCTTTCagcacaatgtaaatattttaaaagctggttTTATCACCCCTAGTGGTTTTTCAGATCACAGTTTGGTAACAGCAACTGTGATGTTTCCATCAGTAAAGCCACGTAGCTCCCATTGGCATTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134459 True 367 lncRNA 0.41 1 28714123 28714489

Neighbor

gene id symbol gene type direction distance location
AMCG00011513 NA coding upstream 139782 28571622 ~ 28574341 (+)
AMCG00011516 NA coding upstream 157434 28548503 ~ 28556689 (+)
AMCG00011512 mrpl22 coding upstream 755200 27952299 ~ 27958923 (+)
AMCG00011511 LOC100196276 coding upstream 798124 27908392 ~ 27915999 (+)
AMCG00011510 NA coding upstream 807272 27895516 ~ 27906851 (+)
AMCG00011518 NA coding downstream 62544 28777033 ~ 28789389 (+)
AMCG00011523 rab24 coding downstream 236821 28951310 ~ 28967738 (+)
AMCG00011525 fgfr4,LOC106568015 coding downstream 404353 29118842 ~ 29139529 (+)
AMCG00011526 LOC106568009 coding downstream 507862 29222351 ~ 29274495 (+)
AMCG00011527 NA coding downstream 564900 29279389 ~ 29321857 (+)
G107502 NA non-coding upstream 47737 28666166 ~ 28666386 (+)
G107450 NA non-coding upstream 425732 28288150 ~ 28288391 (+)
G107408 NA non-coding upstream 830727 27883095 ~ 27883396 (+)
G107402 NA non-coding upstream 839985 27790866 ~ 27874138 (+)
G107382 NA non-coding upstream 1098385 27613961 ~ 27615738 (+)
G107530 NA non-coding downstream 81398 28795887 ~ 28863757 (+)
G107618 NA non-coding downstream 366742 29081231 ~ 29161742 (+)
G107661 NA non-coding downstream 607475 29321964 ~ 29323626 (+)
G107672 NA non-coding downstream 770383 29484872 ~ 29490870 (+)
G107709 NA non-coding downstream 883512 29598001 ~ 29598243 (+)
G107394 NA other upstream 986256 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 1871331 26818052 ~ 26842792 (+)
G107202 NA other upstream 1942909 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 2353348 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 3051944 25607986 ~ 25662179 (+)
AMCG00011519 NA other downstream 154653 28869142 ~ 28876355 (+)
G107741 NA other downstream 983112 29697601 ~ 29699419 (+)
G107784 NA other downstream 1143481 29857970 ~ 29875476 (+)
G107858 NA other downstream 1457299 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 2269490 30983979 ~ 31173789 (+)

Expression


Co-expression Network