G107530


Basic Information

Item Value
gene id G107530
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 28795887 ~ 28863757 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134477
tagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcttttaggtctgtgtgtccctgcagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134477 True 283 lncRNA 0.43 2 28795887 28863757

Neighbor

gene id symbol gene type direction distance location
AMCG00011518 NA coding upstream 6498 28777033 ~ 28789389 (+)
AMCG00011513 NA coding upstream 221546 28571622 ~ 28574341 (+)
AMCG00011516 NA coding upstream 239198 28548503 ~ 28556689 (+)
AMCG00011512 mrpl22 coding upstream 836964 27952299 ~ 27958923 (+)
AMCG00011511 LOC100196276 coding upstream 879888 27908392 ~ 27915999 (+)
AMCG00011523 rab24 coding downstream 87553 28951310 ~ 28967738 (+)
AMCG00011525 fgfr4,LOC106568015 coding downstream 255085 29118842 ~ 29139529 (+)
AMCG00011526 LOC106568009 coding downstream 358594 29222351 ~ 29274495 (+)
AMCG00011527 NA coding downstream 415632 29279389 ~ 29321857 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding downstream 508122 29371879 ~ 29417263 (+)
G107513 NA non-coding upstream 81398 28714123 ~ 28714489 (+)
G107502 NA non-coding upstream 129501 28666166 ~ 28666386 (+)
G107450 NA non-coding upstream 507496 28288150 ~ 28288391 (+)
G107408 NA non-coding upstream 912491 27883095 ~ 27883396 (+)
G107402 NA non-coding upstream 921749 27790866 ~ 27874138 (+)
G107618 NA non-coding downstream 217474 29081231 ~ 29161742 (+)
G107661 NA non-coding downstream 458207 29321964 ~ 29323626 (+)
G107672 NA non-coding downstream 621115 29484872 ~ 29490870 (+)
G107709 NA non-coding downstream 734244 29598001 ~ 29598243 (+)
G107712 NA non-coding downstream 761333 29625090 ~ 29625387 (+)
G107394 NA other upstream 1068020 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 1953095 26818052 ~ 26842792 (+)
G107202 NA other upstream 2024673 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 2435112 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 3133708 25607986 ~ 25662179 (+)
AMCG00011519 NA other downstream 5385 28869142 ~ 28876355 (+)
G107741 NA other downstream 833844 29697601 ~ 29699419 (+)
G107784 NA other downstream 994213 29857970 ~ 29875476 (+)
G107858 NA other downstream 1308031 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 2120222 30983979 ~ 31173789 (+)

Expression


Co-expression Network