G107602


Basic Information

Item Value
gene id G107602
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 28934297 ~ 28967451 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134561
CTCACTACCTTTTATCCCTTAGTCTTTCATTTGTAGAATGTGTATAACTTTActatgaatacaaatgaaaaccacaatTGAGATGTAATATGTGGTAACATCTGTGACACATTGATTTTCAGAAAAGGGGTGTTTATTGCAGCTGTCCAAGTCTTCGACGACAGGAGACATcgaccaaaataaatataaaggtaAGCAGGACATTTCACTACAAAGAAGCccaattccttttttattatgttttcatttaggTTGGTTTACCACAAATAACACTACAAAATGCTGTCACAACCTCAGTTTCACCCCAACAATCAAGCAGATTTCAGTCAATGTTCCACTGTTTGCTCCCGATACAACGGAGCAGTAAAGGCAGTAAAGGGTGCAGAAATTACAGTTTGCTTTCTGAGTTTTATGAATTTTGCCTAAGGGTTCAGACAGTCTGCAAAGTACTCCAATGTTGTGCTTTTGCCTGATGTATGCCTTTcaggaacaaaatataaatctatataactaatatttttctaaataaacaaagacacaaattgATATCCTTGTGCTAAACTCTTAAATTCAATGCTAAATACATCCCAAAATATCTGATTTTAACGTAAGGCAGCTGGCACAATCAGATCTCCCTGGATATGAACTTTGAACTATTTGTTGCCAAGATTCCAGTACGTCTGAATTAAAACTTCAACAGGTTTCATGCCAACAAAATATCCAGTTTGTGATAAAGCCTGTTAGGTCACTGTGTTTGTTGTGGTCTCAACCACTTaagcttatttgtttttagaataTATACTCACCCTTTCATCATTTATAAAGAAGGGGTAATTAAACTTGCCCTGCTGGATGTATGCTGCCTCTTTACCTTTTCGTTGATCCTATTTCTAATTTTCAAAGTTGTTCTTCATTAATCAGTTTTGCCATCATTGAGTACTGTAGAAGTCTTGCAGTCCTtgtaaatggtttgttttacaTCCCTGAAATTAGCCAATGTTCTATACATAATCATAAAAGGCAAAAGGTGAAGGAAGAAATTAACTATGAAACTAAGGTTATAGCTTCAGATGCTTTTAAATATTCCTTACCCCAGCCAACAAGTTGATAAGTTGGTAAAAATAAGTTGATAGAATATGGTAGAAAAAACTATAAACATACTCGGGTGCTTTATCTTgattgtacatttcaaaatggctTTGAGATTTTAATCTCTGATCttctggtgactgtgggggccagtttagtacagtttagtcatgttcaagaaaccaatctgaaatgattcgacctttgtgacatggtgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134561 True 1308 lncRNA 0.35 2 28934297 28967451

Neighbor

gene id symbol gene type direction distance location
AMCG00011522 NA coding downstream 54144 28874133 ~ 28880153 (-)
AMCG00011521 wwc1 coding downstream 82810 28823658 ~ 28851487 (-)
AMCG00011520 rars,LOC106568002 coding downstream 118011 28798230 ~ 28816286 (-)
AMCG00011517 NA coding downstream 908396 28024230 ~ 28025901 (-)
AMCG00011515 NA coding downstream 981154 27916933 ~ 27953143 (-)
AMCG00011524 NA coding upstream 4774 28972225 ~ 29043557 (-)
AMCG00011528 NA coding upstream 241889 29209340 ~ 29222205 (-)
AMCG00011531 NA coding upstream 477152 29444603 ~ 29461210 (-)
AMCG00011532 grk6,LOC107561710 coding upstream 524457 29491908 ~ 29514008 (-)
AMCG00011534 NA coding upstream 718734 29686185 ~ 29739369 (-)
G107597 NA non-coding downstream 1115 28932837 ~ 28933182 (-)
G107503 NA non-coding downstream 267911 28666162 ~ 28666386 (-)
G107471 NA non-coding downstream 370720 28563067 ~ 28563577 (-)
G107411 NA non-coding downstream 1046528 27887467 ~ 27887769 (-)
G107409 NA non-coding downstream 1050717 27883048 ~ 27883580 (-)
G107638 NA non-coding upstream 235114 29202565 ~ 29203192 (-)
G107665 NA non-coding upstream 336090 29303541 ~ 29303835 (-)
G107666 NA non-coding upstream 337480 29304931 ~ 29305160 (-)
G107667 NA non-coding upstream 342422 29309873 ~ 29310176 (-)
G107668 NA non-coding upstream 348951 29316402 ~ 29316892 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 2417790 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 2914897 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 3915965 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 5099223 23829297 ~ 23835074 (-)
AMCG00011428 NA other downstream 5116754 23813857 ~ 23817543 (-)
G107713 NA other upstream 657633 29625084 ~ 29625387 (-)
AMCG00011536 NA other upstream 918765 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 1224122 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 3163043 32130494 ~ 32205554 (-)

Expression


Co-expression Network