G107618


Basic Information

Item Value
gene id G107618
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29081231 ~ 29161742 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134578
ATCGTCCTTTTGAtgtggtgcagttgtcctgtccccttagcagaaaaacacccctaaaacataatgtttctacctccatgtttgacggtggggatggtgttcttggggtcattcctcctcctccaaacacggcgagttgagttgatgccaaagagctcgattttggtctcatctgaccacaacactttcacttCTGAAACATTCagatgtacaggcccgtctgaagtttgccaatgaacatgtgctttcttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134578 True 253 lncRNA 0.46 2 29081231 29161742

Neighbor

gene id symbol gene type direction distance location
AMCG00011523 rab24 coding upstream 113493 28951310 ~ 28967738 (+)
AMCG00011518 NA coding upstream 291842 28777033 ~ 28789389 (+)
AMCG00011513 NA coding upstream 506890 28571622 ~ 28574341 (+)
AMCG00011516 NA coding upstream 524542 28548503 ~ 28556689 (+)
AMCG00011512 mrpl22 coding upstream 1122308 27952299 ~ 27958923 (+)
AMCG00011526 LOC106568009 coding downstream 60609 29222351 ~ 29274495 (+)
AMCG00011527 NA coding downstream 117647 29279389 ~ 29321857 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding downstream 210137 29371879 ~ 29417263 (+)
AMCG00011530 NA coding downstream 256181 29417923 ~ 29436718 (+)
AMCG00011533 NA coding downstream 482426 29644168 ~ 29651012 (+)
G107530 NA non-coding upstream 217474 28795887 ~ 28863757 (+)
G107513 NA non-coding upstream 366742 28714123 ~ 28714489 (+)
G107502 NA non-coding upstream 414845 28666166 ~ 28666386 (+)
G107450 NA non-coding upstream 792840 28288150 ~ 28288391 (+)
G107408 NA non-coding upstream 1197835 27883095 ~ 27883396 (+)
G107661 NA non-coding downstream 160222 29321964 ~ 29323626 (+)
G107672 NA non-coding downstream 323130 29484872 ~ 29490870 (+)
G107709 NA non-coding downstream 436259 29598001 ~ 29598243 (+)
G107712 NA non-coding downstream 463348 29625090 ~ 29625387 (+)
G107714 NA non-coding downstream 463999 29625741 ~ 29626058 (+)
AMCG00011519 NA other upstream 204876 28869142 ~ 28876355 (+)
G107394 NA other upstream 1353364 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 2238439 26818052 ~ 26842792 (+)
G107202 NA other upstream 2310017 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 2720456 26356167 ~ 26360775 (+)
G107741 NA other downstream 535859 29697601 ~ 29699419 (+)
G107784 NA other downstream 696228 29857970 ~ 29875476 (+)
G107858 NA other downstream 1010046 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1822237 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2941131 32102873 ~ 32204915 (+)

Expression


Co-expression Network