G107695


Basic Information

Item Value
gene id G107695
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29402035 ~ 29488480 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134675
GTTTAGACAGCAGTGTTCCTTGTActcaaaaataaagtttaattttattgaataacCAATGCATTTCGacactactgtgtcttcatTGGGTAGCCATGTATGTCATTTCTAAATACCTGACAAATGAggctacaaaatacatttttcatttatatatttttaccagCTCCTCATGTGAGTGAAGACGCTGCAGCGCACCGATGCTTTTAagttacatacatatatagatacatatgtgtgtgtgtgtgtgtgtgtatatgtatataaagcaAGTGTCTTGAGCTGAAGAAATTATTAAACACAAAGGATCATGGGACAAAATTTGAAAATCTGTTACATTTACcaaaattgttttatgtatagcTTCACCAATGgcacattaatttaatatggaAGTTCAGTTACCTAAattgaaaactgtaaagatcCCCATCATTGATATTGTGCAGTTAAGGCATGGGAGGTGTAAACTTTAACCTGCCACTCCATTGATTTTGATTTCCTATCCCTGTTATATCAACGAATTTGTGTAGTTTactctaggctgaatcagtgttcagcatactccaaaattaaatatttgataagTATAAGTTAATGAACAATATCTATTCACTAAGAGGAATCTCTGATAAAGATTCATGAATAAAGGGTATGCACACTTTCAACTACAAGTGTATGTATCTATGCCTGttagaatatatacatatgtttgtgtgtgttatgcaCTACTTTAATTCCCATAAATGGGCTTGATAAGTTGGCATTCCTGATGAGCTCCAGTTACTTGTACTTGTATTGCCTTTCCCTGTTTTGAAACCAAGTTGTTTCTGCTGTGTTACATTAATTcatcattttccttttctattaaCATGAACCACAAAAATGTCTCAAGATGCAAGTTGCTTCCTCAGTTCCATAGAAGTAGTGTGAATGTACTGACCACAGACATTTCCCTGCCTTATATTATTCAATGTTTGCTTATCATTTCtgggatttttttgtatttgattatttgttttgttttgaatctttTACACTGGGCTTTCAAGAACCTTTGGATTCCACTGAAGAAATCTGAGACAGGCTCCCCATTCAATGGGGCTCAATTCTGAAGCTTTACACCAAAGTAATGATGAGCTTGCCTCTGATTGTCTTCAGACAGGAAAACAGGAAGGTTATGTTTTCCTTATTGCcctgtgtaaattgtgattAAGAGGGGGGTTGGGGTGACCTTGCAAATGCTGTGTATAGGAAGGTAGTATTCACTGTAACTCATGACAGCACTGTATACTTAAGACTGAAGAGCAAGCCAAGTGATTCAGACCATGTGAAtccaaactatttttttttttttaaccaaaattaattattgttacaGAGCCTATAATTTTAACATCTGTGCCAAGTTTGTCTGGAAACATTCTACTTTCCTTGCTATCTGTAGGttaaaaggaaacagaaataagtaatccttttttttctacTTCCCAGATTTAAAGGTAATATGCCAGACTTGATTGTTTGGTTACGTGACCAAATCAGTCAATGCTAGaatttttcttttggttttgttttcaggtgagtgaaaacttttttgtattttagtagAGACctactaaaacaaaatgatgatgatgatgatgatgatgatgaggtttgtatatatatatataNNtgtgtgtgtgtgtgtgtatg
>TU134682
GTTTAGACAGCAGTGTTCCTTGTActcaaaaataaagtttaattttattgaataacCAATGCATTTCGacactactgtgtcttcatTGGGTAGCCATGTATGTCATTTCTAAATACCTGACAAATGAggctacaaaatacatttttcatttatatatttttaccagCTCCTCATGTGAGTGAAGACGCTGCAGCGCACCGATGCTTTTAagttacatacatatatagatacatatgtgtgtgtgtgtgtgtgtgtatatgtatataaagcaAGTGTCTTGAGCTGAAGAAATTATTAAACACAAAGGATCATGGGACAAAATTTGAAAATCTGTTACATTTACcaaaattgttttatgtatagcTTCACCAATGgcacattaatttaatatggaAGTTCAGTTACCTAAattgaaaactgtaaagatcCCCATCATTGATATTGTGCAGTTAAGGCATGGGAGGTGTAAACTTTAACCTGCCACTCCATTGATTTTGATTTCCTATCCCTGTTATATCAACGAATTTGTGTAGTTTactctaggctgaatcagtgttcagcatactccaaaattaaatatttgataagTATAAGTTAATGAACAATATCTATTCACTAAGAGGAATCTCTGATAAAGATTCATGAATAAAGGGTATGCACACTTTCAACTACAAGTGTATGTATCTATGCCTGttagaatatatacatatgtttgtgtgtgttatgcaCTACTTTAATTCCCATAAATGGGCTTGATAAGTTGGCATTCCTGATGAGCTCCAGTTACTTGTACTTGTATTGCCTTTCCCTGTTTTGAAACCAAGTTGTTTCTGCTGTGTTACATTAATTcatcattttccttttctattaaCATGAACCACAAAAATGTCTCAAGATGCAAGTTGCTTCCTCAGTTCCATAGAAGTAGTGTGAATGTACTGACCACAGACATTTCCCTGCCTTATATTATTCAATGTTTGCTTATCATTTCtgggatttttttgtatttgattatttgttttgttttgaatctttTACACTGGGCTTTCAAGAACCTTTGGATTCCACTGAAGAAATCTGAGACAGGCTCCCCATTCAATGGGGCTCAATTCTGAAGCTTTACACCAAAGTAATGATGAGCTTGCCTCTGATTGTCTTCAGACAGGAAAACAGGAAGGTTATGTTTTCCTTATTGCcctgtgtaaattgtgattAAGAGGGGGGTTGGGGTGACCTTGCAAATGCTGTGTATAGGAAGGTAGTATTCACTGTAACTCATGACAGCACTGTATACTTAAGACTGAAGAGCAAGCCAAGTGATTCAGACCATGTGAAtccaaactatttttttttttttaaccaaaattaattattgttacaGAGCCTATAATTTTAACATCTGTGCCAAGTTTGTCTGGAAACATTCTACTTTCCTTGCTATCTGTAGGttaaaaggaaacagaaataagtaatccttttttttctacTTCCCAGATTTAAAGGTAATATGCCAGACTTGATTGTTTGGTTACGTGACCAAATCAGTCAATGCTAGaatttttcttttggttttgttttcaggtgagtgaaaacttttttgtattttagtagAGACctactaaaacaaaatgatgatgatgatgatgatgatgatgaggtttgtatatatatatatatgtgtgtgtgtgtgtgtatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134675 True 1698 lncRNA 0.34 2 29402035 29488480
TU134682 False 1696 lncRNA 0.34 2 29402035 29488480

Neighbor

gene id symbol gene type direction distance location
AMCG00011528 NA coding downstream 179830 29209340 ~ 29222205 (-)
AMCG00011524 NA coding downstream 358478 28972225 ~ 29043557 (-)
AMCG00011522 NA coding downstream 521882 28874133 ~ 28880153 (-)
AMCG00011521 wwc1 coding downstream 550548 28823658 ~ 28851487 (-)
AMCG00011520 rars,LOC106568002 coding downstream 585749 28798230 ~ 28816286 (-)
AMCG00011532 grk6,LOC107561710 coding upstream 3428 29491908 ~ 29514008 (-)
AMCG00011534 NA coding upstream 197705 29686185 ~ 29739369 (-)
AMCG00011535 eif4ebp3l,eif4ebp3,LOC107587081,LOC107576657 coding upstream 478995 29967475 ~ 29982671 (-)
AMCG00011537 NA coding upstream 498579 29987059 ~ 30031892 (-)
AMCG00011541 LOC103365697 coding upstream 566352 30054832 ~ 30058232 (-)
G107669 NA non-coding downstream 78382 29322885 ~ 29323653 (-)
G107668 NA non-coding downstream 85143 29316402 ~ 29316892 (-)
G107667 NA non-coding downstream 91859 29309873 ~ 29310176 (-)
G107666 NA non-coding downstream 96875 29304931 ~ 29305160 (-)
G107665 NA non-coding downstream 98200 29303541 ~ 29303835 (-)
G107705 NA non-coding upstream 68328 29556808 ~ 29557312 (-)
G107711 NA non-coding upstream 129041 29617521 ~ 29617738 (-)
G107728 NA non-coding upstream 183091 29671571 ~ 29673113 (-)
G107732 NA non-coding upstream 192330 29680810 ~ 29681026 (-)
G107765 NA non-coding upstream 298554 29787034 ~ 29787355 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 2885528 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 3382635 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 4383703 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 5566961 23829297 ~ 23835074 (-)
AMCG00011428 NA other downstream 5584492 23813857 ~ 23817543 (-)
G107713 NA other upstream 136604 29625084 ~ 29625387 (-)
AMCG00011536 NA other upstream 397736 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 703093 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 2642014 32130494 ~ 32205554 (-)

Expression


Co-expression Network