G107709


Basic Information

Item Value
gene id G107709
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29598001 ~ 29598243 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134699
gacatctgctttttgtatccatcacctcttcacgggaggacagatcgtaaacggacccagacctgtatcttctgattggatgaacggccataagatgttacgtcattttcctataaagttgtactcatgtttgtaaacattaagtcctcactgaaggaattattcctgacgtggggcttccgagccggcttgattaaagttctatttgctttatctccacgacttctccacttatttccgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134699 True 243 lncRNA 0.43 1 29598001 29598243

Neighbor

gene id symbol gene type direction distance location
AMCG00011530 NA coding upstream 161283 29417923 ~ 29436718 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding upstream 180738 29371879 ~ 29417263 (+)
AMCG00011527 NA coding upstream 276144 29279389 ~ 29321857 (+)
AMCG00011526 LOC106568009 coding upstream 323506 29222351 ~ 29274495 (+)
AMCG00011525 fgfr4,LOC106568015 coding upstream 458472 29118842 ~ 29139529 (+)
AMCG00011533 NA coding downstream 45925 29644168 ~ 29651012 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding downstream 404957 30003200 ~ 30057500 (+)
AMCG00011542 LOC105026271 coding downstream 584159 30182402 ~ 30194886 (+)
AMCG00011545 NA coding downstream 639072 30237315 ~ 30243219 (+)
AMCG00011548 NA coding downstream 661295 30259538 ~ 30261357 (+)
G107672 NA non-coding upstream 107131 29484872 ~ 29490870 (+)
G107661 NA non-coding upstream 274375 29321964 ~ 29323626 (+)
G107618 NA non-coding upstream 436259 29081231 ~ 29161742 (+)
G107530 NA non-coding upstream 734244 28795887 ~ 28863757 (+)
G107513 NA non-coding upstream 883512 28714123 ~ 28714489 (+)
G107712 NA non-coding downstream 26847 29625090 ~ 29625387 (+)
G107714 NA non-coding downstream 27498 29625741 ~ 29626058 (+)
G107729 NA non-coding downstream 78349 29676592 ~ 29676880 (+)
G107742 NA non-coding downstream 103569 29701812 ~ 29705904 (+)
G107766 NA non-coding downstream 193160 29791403 ~ 29791624 (+)
AMCG00011519 NA other upstream 721646 28869142 ~ 28876355 (+)
G107394 NA other upstream 1870134 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 2755209 26818052 ~ 26842792 (+)
G107202 NA other upstream 2826787 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 3237226 26356167 ~ 26360775 (+)
G107741 NA other downstream 99358 29697601 ~ 29699419 (+)
G107784 NA other downstream 259727 29857970 ~ 29875476 (+)
G107858 NA other downstream 573545 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1385736 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2504630 32102873 ~ 32204915 (+)

Expression


Co-expression Network