G107732


Basic Information

Item Value
gene id G107732
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29680810 ~ 29681026 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134722
ccTGCGATAAGAACCACTAACCACTGACAAGCAACTACCCAAATGCTTACAAAACCACAAACCCACTATATAGCTGCACATTTTTTTGTCCTGATAAAGCAGTTGACCATGCTTCCTTGCCAGTTTGAGTTTGACCAGTTCTTTGGTCTGGTATCTGTGGAAGCACCCAATGTGCTTAGTCAAGCACCAGCGGAGTATCAAGAGCCTTGCTGCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134722 True 217 lncRNA 0.46 1 29680810 29681026

Neighbor

gene id symbol gene type direction distance location
AMCG00011532 grk6,LOC107561710 coding downstream 166802 29491908 ~ 29514008 (-)
AMCG00011531 NA coding downstream 219600 29444603 ~ 29461210 (-)
AMCG00011528 NA coding downstream 458605 29209340 ~ 29222205 (-)
AMCG00011524 NA coding downstream 637253 28972225 ~ 29043557 (-)
AMCG00011522 NA coding downstream 800657 28874133 ~ 28880153 (-)
AMCG00011534 NA coding upstream 5159 29686185 ~ 29739369 (-)
AMCG00011535 eif4ebp3l,eif4ebp3,LOC107587081,LOC107576657 coding upstream 286449 29967475 ~ 29982671 (-)
AMCG00011537 NA coding upstream 306033 29987059 ~ 30031892 (-)
AMCG00011541 LOC103365697 coding upstream 373806 30054832 ~ 30058232 (-)
AMCG00011540 LOC103365697,LOC102790792,LOC102213970 coding upstream 391592 30072618 ~ 30081138 (-)
G107728 NA non-coding downstream 7697 29671571 ~ 29673113 (-)
G107711 NA non-coding downstream 63072 29617521 ~ 29617738 (-)
G107705 NA non-coding downstream 123498 29556808 ~ 29557312 (-)
G107695 NA non-coding downstream 192330 29402035 ~ 29488480 (-)
G107691 NA non-coding downstream 242149 29354415 ~ 29438661 (-)
G107765 NA non-coding upstream 106008 29787034 ~ 29787355 (-)
G107770 NA non-coding upstream 115629 29796655 ~ 29800616 (-)
G107786 NA non-coding upstream 150895 29831921 ~ 29875263 (-)
G107810 NA non-coding upstream 261212 29942238 ~ 29942490 (-)
G107886 NA non-coding upstream 486993 30168019 ~ 30168246 (-)
G107713 NA other downstream 55423 29625084 ~ 29625387 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 3164303 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 3661410 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 4662478 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 5845736 23829297 ~ 23835074 (-)
AMCG00011536 NA other upstream 205190 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 510547 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 2449468 32130494 ~ 32205554 (-)

Expression


Co-expression Network