G107742


Basic Information

Item Value
gene id G107742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29701812 ~ 29705904 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134737
aaggtcgaatcatttcaaattgatttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtgtgtgtgtgtgt

Function

NR:

description
PREDICTED: collagen alpha-1(XIV) chain-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134737 True 332 lncRNA 0.44 2 29701812 29705904

Neighbor

gene id symbol gene type direction distance location
AMCG00011533 NA coding upstream 50800 29644168 ~ 29651012 (+)
AMCG00011530 NA coding upstream 265094 29417923 ~ 29436718 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding upstream 284549 29371879 ~ 29417263 (+)
AMCG00011527 NA coding upstream 379955 29279389 ~ 29321857 (+)
AMCG00011526 LOC106568009 coding upstream 427317 29222351 ~ 29274495 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding downstream 297296 30003200 ~ 30057500 (+)
AMCG00011542 LOC105026271 coding downstream 476498 30182402 ~ 30194886 (+)
AMCG00011545 NA coding downstream 531411 30237315 ~ 30243219 (+)
AMCG00011548 NA coding downstream 553634 30259538 ~ 30261357 (+)
AMCG00011547 NA coding downstream 727070 30432974 ~ 30444408 (+)
G107729 NA non-coding upstream 24932 29676592 ~ 29676880 (+)
G107714 NA non-coding upstream 75754 29625741 ~ 29626058 (+)
G107712 NA non-coding upstream 76425 29625090 ~ 29625387 (+)
G107709 NA non-coding upstream 103569 29598001 ~ 29598243 (+)
G107672 NA non-coding upstream 210942 29484872 ~ 29490870 (+)
G107766 NA non-coding downstream 85499 29791403 ~ 29791624 (+)
G107767 LOC100846954 non-coding downstream 88641 29794545 ~ 29795213 (+)
G107774 NA non-coding downstream 101186 29807090 ~ 29807357 (+)
G107781 NA non-coding downstream 125555 29831459 ~ 29832882 (+)
G107817 NA non-coding downstream 280691 29986595 ~ 29994269 (+)
G107741 NA other upstream 2393 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 825457 28869142 ~ 28876355 (+)
G107394 NA other upstream 1973945 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 2859020 26818052 ~ 26842792 (+)
G107202 NA other upstream 2930598 26770438 ~ 26771214 (+)
G107784 NA other downstream 152066 29857970 ~ 29875476 (+)
G107858 NA other downstream 465884 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1278075 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2396969 32102873 ~ 32204915 (+)

Expression


Co-expression Network