G107765


Basic Information

Item Value
gene id G107765
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29787034 ~ 29787355 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134766
GAGGAAGCATGGATGTCAATTGAAGAAATATAGTGAACTGACTACAGCTGCCTGCAAGAGAAGATATGGGGCTGGGACATCTTCCTCAAATTCCAAACAGATGAAGCTTGAAGAAACAAAGCAGGTGTATCAAATATCTGTTGACAATGCTATACTCCGCTTCATGGTCTCCGGCCCTTCTCCCTTGTTGAACAGCCATCATTCCAAAGACTAGTCCTGGACTTACAGCCAAAGTGCGTGGTCATGTCTCGAACTACTGTGCAGTGCAAGATTGATTCAGCCACAATAACAATGAAGGAGCAGTTGAAGGAAGCAATGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134766 True 322 lncRNA 0.44 1 29787034 29787355

Neighbor

gene id symbol gene type direction distance location
AMCG00011534 NA coding downstream 47665 29686185 ~ 29739369 (-)
AMCG00011532 grk6,LOC107561710 coding downstream 273026 29491908 ~ 29514008 (-)
AMCG00011531 NA coding downstream 325824 29444603 ~ 29461210 (-)
AMCG00011528 NA coding downstream 564829 29209340 ~ 29222205 (-)
AMCG00011524 NA coding downstream 743477 28972225 ~ 29043557 (-)
AMCG00011535 eif4ebp3l,eif4ebp3,LOC107587081,LOC107576657 coding upstream 180120 29967475 ~ 29982671 (-)
AMCG00011537 NA coding upstream 199704 29987059 ~ 30031892 (-)
AMCG00011541 LOC103365697 coding upstream 267477 30054832 ~ 30058232 (-)
AMCG00011540 LOC103365697,LOC102790792,LOC102213970 coding upstream 285263 30072618 ~ 30081138 (-)
AMCG00011539 LOC105907442,LOC105011305,LOC106603918,LOC108439787,LOC107700028,LOC107756157 coding upstream 386336 30173691 ~ 30181506 (-)
G107732 NA non-coding downstream 106008 29680810 ~ 29681026 (-)
G107728 NA non-coding downstream 113921 29671571 ~ 29673113 (-)
G107711 NA non-coding downstream 169296 29617521 ~ 29617738 (-)
G107705 NA non-coding downstream 229722 29556808 ~ 29557312 (-)
G107695 NA non-coding downstream 298554 29402035 ~ 29488480 (-)
G107770 NA non-coding upstream 9300 29796655 ~ 29800616 (-)
G107786 NA non-coding upstream 44566 29831921 ~ 29875263 (-)
G107810 NA non-coding upstream 154883 29942238 ~ 29942490 (-)
G107886 NA non-coding upstream 380664 30168019 ~ 30168246 (-)
G107899 NA non-coding upstream 505907 30293262 ~ 30357585 (-)
G107713 NA other downstream 161647 29625084 ~ 29625387 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 3270527 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 3767634 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 4768702 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 5951960 23829297 ~ 23835074 (-)
AMCG00011536 NA other upstream 98861 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 404218 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 2343139 32130494 ~ 32205554 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G162819 NA non-coding CI01000030 null 10856858 ~ 10857092 (+)
striped catfish (Pangasianodon hypophthalmus) G156093 NA unknown NC_047603.1 CM018549.1 26839952 ~ 26841453 (-)
tiger barb (Puntius tetrazona) G125254 NA non-coding NC_056716.1 CM032085.1 10057741 ~ 10062780 (+)