G107784


Basic Information

Item Value
gene id G107784
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29857970 ~ 29875476 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134787
TGTTCTTGGGTGCGTCGGCATACATGGGTCCAGGAGGGGGAGCGTTCTGCCAGCCGTACTGTGGCTGTGGGTAGCCCTGGTAGGGTGGCTGACCAGGAGCAGGGTAGGATCCGGCAGGACCTGGGGGATAGTTGGGGTATGCAGCATTGGGGTTGGGGTATGCAGCGTTGGGGTTGGGGTATGCAGCGTTGGGGTAGGCAGGATTGGGCTGCTGCATGTGAGGGTAGTCAGGTGCCGAGACCCCAGGCCCTGGATATGGCGGAGGATTCTCGTAATTCATCAGGGACGGCAAGAGCTACCTACAATAGTCTGTCAATTTTCAATAACCCCCCTTTTCCACAATCTCCTTTTTACCGCACTAGACCAAGAACAGAACTCAAGCCGGCTGCACTTTGGTCGCGGTTTCAGAAACGTGACATCATAGCAGCTGTGGGATTTCATTGGAACTTGTGACTCTCCATCACCTGACCGTTCCCCTGCCCACCGCTCTTGGGAAAAATGGAAAGGCAGGGGGACGGCTGTACTACAGGCAATCATGATATGCTATATTTGCCGAAAGCAGGGAATCCCCAGCTTCACATGCTCAGAACAGATACACACGTTTACCATGACACGGCTTTACGTagacacaaaacagacaaaaaaa

Function

NR:

description
PREDICTED: collagen alpha-1(XIV) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134787 True 646 TUCP 0.54 2 29857970 29875476

Neighbor

gene id symbol gene type direction distance location
AMCG00011533 NA coding upstream 206958 29644168 ~ 29651012 (+)
AMCG00011530 NA coding upstream 421252 29417923 ~ 29436718 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding upstream 440707 29371879 ~ 29417263 (+)
AMCG00011527 NA coding upstream 536113 29279389 ~ 29321857 (+)
AMCG00011526 LOC106568009 coding upstream 583475 29222351 ~ 29274495 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding downstream 127724 30003200 ~ 30057500 (+)
AMCG00011542 LOC105026271 coding downstream 306926 30182402 ~ 30194886 (+)
AMCG00011545 NA coding downstream 361839 30237315 ~ 30243219 (+)
AMCG00011548 NA coding downstream 384062 30259538 ~ 30261357 (+)
AMCG00011547 NA coding downstream 557498 30432974 ~ 30444408 (+)
G107781 NA non-coding upstream 25088 29831459 ~ 29832882 (+)
G107774 NA non-coding upstream 50613 29807090 ~ 29807357 (+)
G107767 LOC100846954 non-coding upstream 62757 29794545 ~ 29795213 (+)
G107766 NA non-coding upstream 66346 29791403 ~ 29791624 (+)
G107742 NA non-coding upstream 152066 29701812 ~ 29705904 (+)
G107817 NA non-coding downstream 111119 29986595 ~ 29994269 (+)
G107857 NA non-coding downstream 294525 30170001 ~ 30170380 (+)
G107909 NA non-coding downstream 529934 30405410 ~ 30448646 (+)
G107932 LOC101154678 non-coding downstream 598837 30474313 ~ 30493033 (+)
G107937 NA non-coding downstream 617881 30493357 ~ 30493741 (+)
G107741 NA other upstream 158551 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 981615 28869142 ~ 28876355 (+)
G107394 NA other upstream 2130103 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 3015178 26818052 ~ 26842792 (+)
G107202 NA other upstream 3086756 26770438 ~ 26771214 (+)
G107858 NA other downstream 296312 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1108503 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2227397 32102873 ~ 32204915 (+)

Expression


Co-expression Network