G107810


Basic Information

Item Value
gene id G107810
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29942238 ~ 29942490 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134815
CCTGACCTCCAGGGAGAGGGAATTCGGGCATtttcaacaaaatgaaataacagcACAAGGAAACGTCTATTTATTTCCTCCCAGACAGAAGTGTCTTCTGAAGTAGGTTGTTAAAGGGAAGGTGTTCTTAAAGGGAGAGCGAAACTCTTGTATATGGTCAAAGGCAACAGGGTATACTTGCAGGATGGAGGCACCGCAGCTCCTGCACACTAACTGCACCTCTACAGTGACGCAAAAAGAGGCGTGAAATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134815 True 253 lncRNA 0.46 1 29942238 29942490

Neighbor

gene id symbol gene type direction distance location
AMCG00011534 NA coding downstream 202869 29686185 ~ 29739369 (-)
AMCG00011532 grk6,LOC107561710 coding downstream 428230 29491908 ~ 29514008 (-)
AMCG00011531 NA coding downstream 481028 29444603 ~ 29461210 (-)
AMCG00011528 NA coding downstream 720033 29209340 ~ 29222205 (-)
AMCG00011524 NA coding downstream 898681 28972225 ~ 29043557 (-)
AMCG00011535 eif4ebp3l,eif4ebp3,LOC107587081,LOC107576657 coding upstream 24985 29967475 ~ 29982671 (-)
AMCG00011537 NA coding upstream 44569 29987059 ~ 30031892 (-)
AMCG00011541 LOC103365697 coding upstream 112342 30054832 ~ 30058232 (-)
AMCG00011540 LOC103365697,LOC102790792,LOC102213970 coding upstream 130128 30072618 ~ 30081138 (-)
AMCG00011539 LOC105907442,LOC105011305,LOC106603918,LOC108439787,LOC107700028,LOC107756157 coding upstream 231201 30173691 ~ 30181506 (-)
G107786 NA non-coding downstream 66975 29831921 ~ 29875263 (-)
G107770 NA non-coding downstream 141622 29796655 ~ 29800616 (-)
G107765 NA non-coding downstream 154883 29787034 ~ 29787355 (-)
G107732 NA non-coding downstream 261212 29680810 ~ 29681026 (-)
G107728 NA non-coding downstream 269125 29671571 ~ 29673113 (-)
G107886 NA non-coding upstream 225529 30168019 ~ 30168246 (-)
G107899 NA non-coding upstream 350772 30293262 ~ 30357585 (-)
G107910 NA non-coding upstream 462959 30405449 ~ 30448589 (-)
G107949 NA non-coding upstream 612197 30554687 ~ 30554895 (-)
G107965 NA non-coding upstream 760940 30703430 ~ 30703632 (-)
AMCG00011536 NA other downstream 22218 29886216 ~ 29920020 (-)
G107713 NA other downstream 316851 29625084 ~ 29625387 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 3425731 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 3922838 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 4923906 25012205 ~ 25018332 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 249083 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 2188004 32130494 ~ 32205554 (-)

Expression


Co-expression Network