G107937


Basic Information

Item Value
gene id G107937
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 30493357 ~ 30493741 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134961
ttttaacagtgagagacagaataacaaccaaaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtgtcttttatacaggtaacgagctgagattaggagcactgggctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagctatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134961 True 385 lncRNA 0.43 1 30493357 30493741

Neighbor

gene id symbol gene type direction distance location
AMCG00011547 NA coding upstream 48949 30432974 ~ 30444408 (+)
AMCG00011548 NA coding upstream 232000 30259538 ~ 30261357 (+)
AMCG00011545 NA coding upstream 250138 30237315 ~ 30243219 (+)
AMCG00011542 LOC105026271 coding upstream 298471 30182402 ~ 30194886 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding upstream 435857 30003200 ~ 30057500 (+)
AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding downstream 142641 30636382 ~ 30637300 (+)
AMCG00011552 NA coding downstream 703125 31196866 ~ 31203698 (+)
AMCG00011555 NA coding downstream 1107766 31601507 ~ 31602428 (+)
AMCG00011556 NA coding downstream 1176404 31670145 ~ 31709275 (+)
AMCG00011562 LOC102778048,LOC104948140 coding downstream 1815825 32309566 ~ 32423292 (+)
G107932 LOC101154678 non-coding upstream 324 30474313 ~ 30493033 (+)
G107909 NA non-coding upstream 44711 30405410 ~ 30448646 (+)
G107857 NA non-coding upstream 322977 30170001 ~ 30170380 (+)
G107817 NA non-coding upstream 499088 29986595 ~ 29994269 (+)
G107781 NA non-coding upstream 660475 29831459 ~ 29832882 (+)
G107962 NA non-coding downstream 182884 30676625 ~ 30676996 (+)
G107971 NA non-coding downstream 408876 30902617 ~ 30902827 (+)
G107987 NA non-coding downstream 725574 31219315 ~ 31219537 (+)
G108023 NA non-coding downstream 1051573 31545314 ~ 31545605 (+)
G108025 NA non-coding downstream 1068424 31562165 ~ 31562457 (+)
G107858 NA other upstream 281267 30171788 ~ 30212090 (+)
G107784 NA other upstream 617881 29857970 ~ 29875476 (+)
G107741 NA other upstream 793938 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 1617002 28869142 ~ 28876355 (+)
G107394 NA other upstream 2765490 27712206 ~ 27727867 (+)
AMCG00011551 NA other downstream 490238 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 1609132 32102873 ~ 32204915 (+)

Expression


Co-expression Network