G108035


Basic Information

Item Value
gene id G108035
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 31598630 ~ 31598902 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135075
ctgtaggtaataaaaaatctttgaaatggacgagagccgaaatcccgacacagagctatgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagcccccctccaataggacactgggggctgaaaccgaaatccaatctcaaaaactgaagaaccaatcacctattgatctgacaggcgtataaagaacagcgcacagtctctctctctctctctctctctctctcacctgaaccagaaactcgctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135075 True 273 lncRNA 0.47 1 31598630 31598902

Neighbor

gene id symbol gene type direction distance location
AMCG00011552 NA coding upstream 394932 31196866 ~ 31203698 (+)
AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding upstream 961330 30636382 ~ 30637300 (+)
AMCG00011547 NA coding upstream 1154222 30432974 ~ 30444408 (+)
AMCG00011548 NA coding upstream 1337273 30259538 ~ 30261357 (+)
AMCG00011545 NA coding upstream 1355411 30237315 ~ 30243219 (+)
AMCG00011555 NA coding downstream 2605 31601507 ~ 31602428 (+)
AMCG00011556 NA coding downstream 71243 31670145 ~ 31709275 (+)
AMCG00011562 LOC102778048,LOC104948140 coding downstream 710664 32309566 ~ 32423292 (+)
AMCG00011564 LOC106563625,LOC105010896,LOC107589094,LOC101168142 coding downstream 833938 32432840 ~ 32436433 (+)
AMCG00011565 LOC104948140,LOC103368254,LOC104924602 coding downstream 850602 32449504 ~ 32451892 (+)
G108032 LOC107575789,LOC100846954 non-coding upstream 22737 31575593 ~ 31575893 (+)
G108025 NA non-coding upstream 36173 31562165 ~ 31562457 (+)
G108023 NA non-coding upstream 53025 31545314 ~ 31545605 (+)
G107987 NA non-coding upstream 379093 31219315 ~ 31219537 (+)
G107971 NA non-coding upstream 695803 30902617 ~ 30902827 (+)
G108056 NA non-coding downstream 47695 31646597 ~ 31674103 (+)
G108067 NA non-coding downstream 195236 31794138 ~ 31794386 (+)
AMCG00011551 NA other upstream 424841 30983979 ~ 31173789 (+)
G107858 NA other upstream 1386540 30171788 ~ 30212090 (+)
G107784 NA other upstream 1723154 29857970 ~ 29875476 (+)
G107741 NA other upstream 1899211 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 2722275 28869142 ~ 28876355 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 503971 32102873 ~ 32204915 (+)

Expression


Co-expression Network