AMCG00011628


Basic Information

Item Value
gene id AMCG00011628
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1499357 ~ 1514179 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011628
ATGGCCGCAGGCGACGATTCCCCGCTGCCGGCCACCATCGCGGCCAGCCGGAGCGTCGAGAAAGCCTTCGAGGAGGCGGCGGCCAGCGGGGCGCTCAGCCTGGCCAACAGGAAGCTCAAGGAGTTCCCCCGCACGTCCCGCAACTTCGACCTTCTGTACCACAACTGTGTGCGCGGCATCACCCTCTCCGTGTGCAACCTGCAAGCCCTCACTTACCTCAACGTCAGccgtAACCAGCTGTCGTGTCTGCCCCCCTCCCTGTGCCAGCTGCCCCTGCGGgATGTGAGCTGTAACGAGCTGACGGCCCTCCCCACGGAGATCGGACAGCTGGAGTCTCTGCGGGACCTCAACCTGCGGAGGAACCACCTGACCACGCTGCCCGAGGAGCTGGCGGAGCTGCCGTTGGTGCGCCTGGACGTGTCGTGTAACCGCGTGACACGTGTCCCAGTGTGCTACCGCCACCTGCGCCACCTGCAGACCATCAACCTGGACAACAACCCCCTACAGTCCCCCCCAGCGCAGatctgCACGAAGGGCAAGATCCACATCTTCAAGTACCTGAACATCGAGGCCTGCAGCAAGACGGCGCCCGAGGAGTTCGAGAGGCCGCTGCGGCCCAGCGGCTTCAACGGCTGcctgTCCGATCAGGAGCTGTTTCCCGCCCGGCCCTATGGAGGCCTGGACTCCGGCTTCAACAGCGTGGACAGCGGCAGCAAGAGGTGGTCGGGCAACGAGTCTACGGACGACTTCTCTGAGCTGTCCCTGCGCATGGCCGAGATCTCCCGGGACCAGAGGCACCTGCGGGAGGAGAGGGGGACGCCCGCCCCGGTGAACGGAGAGGTGGACCAGGTGGACTTCATTGTGGGCAACgtgacagaggaggaggaggaggaggaagaggagcagcCGCTGCCGCGGAGGCCGTCTGGGTGCCGGCCCACCCTTCAGCAGATAAACACGGCGCACCCACAGTTTACTGAAGACAGCGTCGAAAACAGGAAGCGTCTCGGTGGCGACGGCAGCTCACACAGGAAGCAGCGCCGGTGGTGGCTCTTCAGACAGCAGCTCCTCACACCTCGGCCTCCGACAGAGGAGTCAGAGTTCAGATCACATGTCCAGTCCGGCTCCTCAGCGCTGTCCCGGCAGGACAGACTCGCCGCCCTCCCAGACCCCCTCGGCTCTGTGCACAGTCTGGTGGACACGGGCCGCTGTGACTCAAAGCCCTCCCTGTCGCGCTCCCCCAGGGAGGACAGGGAGACCATCGCACAGCTGCGCAAGGTGAACAccccctccctttctccctcaATTCGAAACAAACTTCCACTCAAATGTGGACAGAGGATATtgaaaacgcTGGAGACCAGACTGAAGGTCACTCTGGCGGACGACCTGGGCGAGGCCCTGTCCAACGGCGCCGTCCTCTGCCAGCTGGCCAATCACGTGCGGCCGCGCTCCGTCACCATGATCCACGTCCCCTCCCCCGCCGTGGTGAGCCAATCGCACGCCTCTCCCCGCCCCTCACCGTCCCAGGGGATTTGTGGCCACGCCCTCTCACGGCCCCACAGATCCCTGGGCCAAAGCTCAGCGCCGCCAAGTGCCGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011628 True 1605 mRNA 0.65 15 1499357 1514179

Neighbor

gene id symbol gene type direction distance location
AMCG00011629 NA coding downstream 2567 1494743 ~ 1496790 (-)
AMCG00011624 NA coding downstream 25899 1468579 ~ 1473458 (-)
AMCG00011615 NA coding downstream 237581 1258459 ~ 1261776 (-)
AMCG00011614 NA coding downstream 297251 1194899 ~ 1202106 (-)
AMCG00011609 NA coding downstream 314826 1181018 ~ 1184531 (-)
AMCG00011627 NA coding upstream 15440 1529619 ~ 1535645 (-)
AMCG00011636 NA coding upstream 79528 1593707 ~ 1596199 (-)
AMCG00011634 NA coding upstream 154717 1668896 ~ 1670200 (-)
AMCG00011635 LOC108442099 coding upstream 159263 1673442 ~ 1683532 (-)
AMCG00011638 aurkb,plk4,LOC107704466,LOC107705065,LOC100706117 coding upstream 207518 1721697 ~ 1724576 (-)
G131546 NA non-coding downstream 103005 1395693 ~ 1396352 (-)
G131507 NA non-coding downstream 323215 1095029 ~ 1176142 (-)
G131508 NA non-coding downstream 400561 1097270 ~ 1098796 (-)
G131475 NA non-coding downstream 555456 890283 ~ 943901 (-)
G131477 NA non-coding downstream 645312 848070 ~ 854045 (-)
G131604 NA non-coding upstream 91873 1606052 ~ 1606285 (-)
G131615 NA non-coding upstream 117278 1631457 ~ 1631760 (-)
G131625 NA non-coding upstream 128626 1642805 ~ 1643028 (-)
G131633 NA non-coding upstream 152375 1666554 ~ 1668680 (-)
G131691 NA non-coding upstream 261310 1775489 ~ 1845721 (-)
AMCG00011603 NA other downstream 493220 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 689200 790008 ~ 810157 (-)
AMCG00011597 mink1,LOC103395422,LOC107746403,LOC107596107 other downstream 778950 699818 ~ 720407 (-)
G131456 NA other downstream 832047 665377 ~ 667310 (-)
G131420 NA other downstream 1084203 414517 ~ 415154 (-)
AMCG00011640 NA other upstream 172130 1686309 ~ 1704999 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other upstream 193538 1707717 ~ 1719226 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other upstream 335720 1849899 ~ 1864772 (-)
G131863 NA other upstream 779454 2293633 ~ 2296453 (-)
G132117 NA other upstream 946928 2461107 ~ 2461750 (-)

Expression


Co-expression Network