AMCG00011643


Basic Information

Item Value
gene id AMCG00011643
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1764743 ~ 1767565 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011643
ATGCCCAgacaggagcagaagtgcgcTCCCGGTTTGGACACTCCCGTTCCGGCCGGGTTCTATTTCCAGGACTGCTGGACCTCGCTGGTCTGCTCCGCTCGCAGTTTCTCCAGCGCAGAGCAGATAGTTGGCTGCCTGAAGGACAAGCAGCTGTACATGATGGGCGACTCCACGATGCGCCAGTGGTTCGAATACCTGCAGACGACTGTGCCCAAAAGACTAACATCCTCCATTCCTCCAGCTCTGAAGCTCATgaacccccaaaacaaacatcaaGCAGGGCCTCTGCTGGCCGTGGACACCAGTCACAATGTGGTCCTGCTTTGGCGAGCTCACGGCCTGCCCTTACGGATGTTCAAGGTCCCGAGGGCACAGCTGCACTACATCGCCAACGAGATTGACAGGCTGGCGGGAGACACCTACACCGTGGTGGGCTTCAACCTCTGGGCGCACTTCACCACCTTCCCACTGGCCACATTTGTCCGCCAGGTTGCAATCATCCGAGAGGCGGTGCGCTCGCTGCTGCGCCGGAGCCCCCAGACCCTCGTGGTCATCAAGTCGGCCAACACCGGCTACAAGGATGTCTACGGCAGTGACTGGCTGTCCCTGCAGCTGGACACCGTGCTCAGGAGGATGTTCCAGGGCCTCCCTGTGGCCTTCATCGACGTCTGGCAGATGACCTCCTGCCACTACACCCCAGACCAGATCCACCCCCAGCCTGTCATCATCCAGAACGAAGTTGACCTGTTCCTGTCCTTTGTCTGTCCCCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011643 True 774 mRNA 0.60 3 1764743 1767565

Neighbor

gene id symbol gene type direction distance location
AMCG00011641 NA coding downstream 14209 1742088 ~ 1750534 (-)
AMCG00011644 NA coding downstream 24328 1737641 ~ 1740415 (-)
AMCG00011639 tmem107,LOC106574226 coding downstream 29031 1726445 ~ 1735712 (-)
AMCG00011638 aurkb,plk4,LOC107704466,LOC107705065,LOC100706117 coding downstream 40167 1721697 ~ 1724576 (-)
AMCG00011635 LOC108442099 coding downstream 81211 1673442 ~ 1683532 (-)
AMCG00011642 NA coding upstream 13 1767578 ~ 1772285 (-)
AMCG00011647 NA coding upstream 30067 1797632 ~ 1799106 (-)
AMCG00011650 NA coding upstream 51426 1818991 ~ 1824811 (-)
AMCG00011651 NA coding upstream 103126 1870691 ~ 1873493 (-)
AMCG00011649 NA coding upstream 105940 1873505 ~ 1875236 (-)
G131633 NA non-coding downstream 96063 1666554 ~ 1668680 (-)
G131625 NA non-coding downstream 121715 1642805 ~ 1643028 (-)
G131615 NA non-coding downstream 132983 1631457 ~ 1631760 (-)
G131604 NA non-coding downstream 158458 1606052 ~ 1606285 (-)
G131546 NA non-coding downstream 368391 1395693 ~ 1396352 (-)
G131691 NA non-coding upstream 7924 1775489 ~ 1845721 (-)
G131709 NA non-coding upstream 99228 1866793 ~ 1879291 (-)
G131741 NA non-coding upstream 133028 1900593 ~ 1915550 (-)
G131751 NA non-coding upstream 179882 1947447 ~ 1948939 (-)
G131756 NA non-coding upstream 232844 2000409 ~ 2002192 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 45517 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 59744 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 758606 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 954586 790008 ~ 810157 (-)
AMCG00011597 mink1,LOC103395422,LOC107746403,LOC107596107 other downstream 1044336 699818 ~ 720407 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other upstream 82334 1849899 ~ 1864772 (-)
G131863 NA other upstream 526068 2293633 ~ 2296453 (-)
G132117 NA other upstream 693542 2461107 ~ 2461750 (-)
G132140 NA other upstream 799180 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 842163 2609728 ~ 2617328 (-)

Expression


Co-expression Network