AMCG00011644


Basic Information

Item Value
gene id AMCG00011644
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1737641 ~ 1740415 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011644
ATGGTTCTTCTGTGTCTCCTTTATTCCATCAAGGTATATTTGTACTGTTGGAAGAAGACAACTCAACCTTTTAGTATAAAGCCACCCAGCCCCCTCTCCCAACATCAGTGGGACCAGATCCACTCCGGCACAAACCACAGCTGTCCAGTACAGACCctgaccccaccccctcccGCAGCGAACGACACCCACCTCAGCCCAGAGGAGTGGCAGGCTCTCAGGGAGGCTCTTCGCTGGCTGTCCCCAGACAGGCCTGTCACCTCCCTGGACAACACCACAGACCCCAGACACTGCTTCTACTACGTGGAGAACCTGAGGGACAGTTACACAGTGGGGGACACTCTGAATGTCACTCTGGTCGCCAAGGATTTCTCCAGGAAACCCAAAAGCTATGGAGGGGACTTCTTCCAGGCTCGGCTGCACTCCCCAAAGCTCAAAGCCAGCACTTATGGCTCGGTGCAGGATCACTGCAACGGGACCTACACAGTCCACTTCTCCCTCCTGTGGCCCGGTCAGGCCCGGATCTCCCTGCGGCTGATCCACTCCAGTGAAGCTGTGCAGGTGCTGCTCCGGCACAGGGAGGCCGACCCCAACAAGGTGTCCTTCCGGGGGTATTTCGAGGAGGGGGGCAGATCGGAGACTGTAGTCTGCAACGCCCAGAGGAGCGGCTCACGCTGCTGCTGTGAGTACAAGGATCCTGCGACCGGGGAGATGTGGTTCTGCCAGAAACCAGCTGCCCTGCCCTGCCACGCCCTCGTCTACCACAGCGCTGGGACCTACCAGGCAAAACTGACCGACCTGGACAAGAGTCTTTTGGACACGAAGTTAATAGACATTGGGATATCAGGAATTGACCCCATAATCCACATCCTGCCCTTGGACAAAGAACACAgacaggagcagaagtgcgcTCCCGGTTTGGACACTCCGGTTCCGGCCGGGTTCTATTTCCAGGACCGCTGGACCTCGCTGGTCTGCTCCGCTCGCAGTTTCTCCAGCGCAGAGCAGATAGTCGGCTGCCTGAAGGACAAGCAGCTGTACATGATGGGCGACTCCACGTTGCGCCAGTGGTTCGAATACCTGCAGACGACTGTGCCCActCTGAAGCTCATGAACCTTCACACCTCAGGCCAGTCGGGGCCTCTCCTGGCAGTGGACACCGGTAACAATGTGGTCCTGCGCTGGCGAGCTCACGGCCTGCCCATCCGCACGCTCAAGGTCCCGAGGGTGCGGCTGCACTACATCGCCAACGAGATCGACGGGCTGGCGGGAGACGCCTACACCGTGGTGGCCTTCAACCTCTGGGCGCACTTCACCACCTTCCCACTGGCCACGTTTGTCCGCCGGGTCGCCATCATCCGAGAGGCGGTGCGCTCGCTGCTGCGCCGGAGCCCCCAGACCCTCGTGGTCATCAAGTCGGCCAACACCGGCTACAAGGACGTCTACGGCAGTGACTGGCTGTCCCTGCAGCTGGACACCGTGCTCAGGAGGATGTTCCAGGGCCTCCCTGTGGCCTTCATCGACGTCTGGCAGATGACCTCCTGCCACTACACACCGGACCAGATCCACCCCCAGCCTGTCGTCATCAAAAACGAAGTTGACCTGTTCCTGTCCTTTGTCTGTCCCCAGTGAAGCTCCCTATGGGTGTCCCACAGAGAAGGAACCATCTCCATGACGGACAGCCGGTATGCAGCGTGCCGAGACAGGAGGTCTGGGTGGCCCTCTGCCTCCTCAGGGTCACTGCAAATGCGCCCGTTCCTCTTGGCATCTCCCATTGATTGCTCAAATGCCATCTCCACACACAGGGGCTGGAGATCTCATTATGGTATAATGTATTCCCTACCTTGACAGAGTATCAAAGCTATAAGTTATTATAccctatttcagtttttgtcagGGGTGTTCTCGGAAACCGCTGGAATGGGTTTGAGTTTGAGCCACTCTTTGcactgcaacagctgcttgttCGATGCCTTTATTAAAAGAGTAGAAGCCACTACAAAAGGTGATATACATTCCTGGTTTCATACAGTAGATGAAGAGCACAGTGTTAAAAGTAGCATTTTTAAGCGACCTCACTGTCCTTTCAATCATCCGGAACTGCAGCCATTAACAAACTTGAATGTCATGTTCATTGTTCctttcttttaatgtattttgatgaTTGTTCACTGTTTTGTTCTTTGGTGTAGGTCAAGTGTTTACttgatgaataaaacaaactgaaacaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011644 True 2233 mRNA 0.55 4 1737641 1740415

Neighbor

gene id symbol gene type direction distance location
AMCG00011639 tmem107,LOC106574226 coding downstream 1929 1726445 ~ 1735712 (-)
AMCG00011638 aurkb,plk4,LOC107704466,LOC107705065,LOC100706117 coding downstream 13065 1721697 ~ 1724576 (-)
AMCG00011635 LOC108442099 coding downstream 54109 1673442 ~ 1683532 (-)
AMCG00011634 NA coding downstream 67441 1668896 ~ 1670200 (-)
AMCG00011636 NA coding downstream 141442 1593707 ~ 1596199 (-)
AMCG00011641 NA coding upstream 1673 1742088 ~ 1750534 (-)
AMCG00011643 NA coding upstream 24328 1764743 ~ 1767565 (-)
AMCG00011642 NA coding upstream 27163 1767578 ~ 1772285 (-)
AMCG00011647 NA coding upstream 57217 1797632 ~ 1799106 (-)
AMCG00011650 NA coding upstream 78576 1818991 ~ 1824811 (-)
G131633 NA non-coding downstream 68961 1666554 ~ 1668680 (-)
G131625 NA non-coding downstream 94613 1642805 ~ 1643028 (-)
G131615 NA non-coding downstream 105881 1631457 ~ 1631760 (-)
G131604 NA non-coding downstream 131356 1606052 ~ 1606285 (-)
G131546 NA non-coding downstream 341289 1395693 ~ 1396352 (-)
G131691 NA non-coding upstream 35074 1775489 ~ 1845721 (-)
G131709 NA non-coding upstream 126378 1866793 ~ 1879291 (-)
G131741 NA non-coding upstream 160178 1900593 ~ 1915550 (-)
G131751 NA non-coding upstream 207032 1947447 ~ 1948939 (-)
G131756 NA non-coding upstream 259994 2000409 ~ 2002192 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 18415 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 32642 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 731504 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 927484 790008 ~ 810157 (-)
AMCG00011597 mink1,LOC103395422,LOC107746403,LOC107596107 other downstream 1017234 699818 ~ 720407 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other upstream 109484 1849899 ~ 1864772 (-)
G131863 NA other upstream 553218 2293633 ~ 2296453 (-)
G132117 NA other upstream 720692 2461107 ~ 2461750 (-)
G132140 NA other upstream 826330 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 869313 2609728 ~ 2617328 (-)

Expression


Co-expression Network