AMCG00011651


Basic Information

Item Value
gene id AMCG00011651
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1870691 ~ 1873493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011651
ATGCATCTGTTCCCAGGCCGACCACGATACACCGATCAGAGTCCTCGACCCGCTGCCGTGTTTCTGTTTCAGGCACATGTCCAAGAGCCGGAGCCGGCGGGGGCTGGAGGAGACCTGGAGCCCCCCGGCGCAGACCGCCACCCTGAGCAGCAACGCGGCCCCTGGCCCCCCACCCACCGGCCGCCCCGCCAGGACGCAGGTGAGCGAGGGTCCGAGCAGAGCCATGACTGGGGACTGGACCTGACTCCTCCTTCTCCTTATTCTCCTCCACGGTgtcccccatctctctctttccctctccatTACTGTTATCTTGCTTCTCAGCCCCAGCAGCCCACCTGGGAGAGAGCGCCCCCCGTGTCCCCGGCCGACCTGCGCACCGACGTCTTCACCGCCCCCCCCGCCCGCTCCCAGAGCTTCCGAGAGCCGCCTAGAGGGCGCAGcgtctcctcttcctcctcttcctccggCTCTGCCCCTTTCCGCCCCTTCCCCAAGTCCTCCAGCATCGACTTCGGAGGACTCGGCTCTTCCCAGCATGCCCCTACCAGCCCGCCCCCCCCCAGTGCGGACAAGTACGCCGCGCTGTCACAGCTGGAGGGCGTCAGTGCAGAGACGCAGCCAGGTACCCTTAcccgcccccccgccccacgGCTGTCCCCTGTGGGTGGCGCTCGGGTCTGA

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011651 True 684 mRNA 0.68 3 1870691 1873493

Neighbor

gene id symbol gene type direction distance location
AMCG00011650 NA coding downstream 45880 1818991 ~ 1824811 (-)
AMCG00011647 NA coding downstream 71585 1797632 ~ 1799106 (-)
AMCG00011642 NA coding downstream 98406 1767578 ~ 1772285 (-)
AMCG00011643 NA coding downstream 103126 1764743 ~ 1767565 (-)
AMCG00011641 NA coding downstream 120157 1742088 ~ 1750534 (-)
AMCG00011649 NA coding upstream 12 1873505 ~ 1875236 (-)
AMCG00011658 NA coding upstream 28879 1902372 ~ 1904818 (-)
AMCG00011659 NA coding upstream 38151 1911644 ~ 1915846 (-)
AMCG00011660 NA coding upstream 63242 1936735 ~ 1940512 (-)
AMCG00011657 NA coding upstream 105665 1979158 ~ 1983086 (-)
G131691 NA non-coding downstream 24970 1775489 ~ 1845721 (-)
G131633 NA non-coding downstream 202011 1666554 ~ 1668680 (-)
G131625 NA non-coding downstream 227663 1642805 ~ 1643028 (-)
G131615 NA non-coding downstream 238931 1631457 ~ 1631760 (-)
G131604 NA non-coding downstream 264406 1606052 ~ 1606285 (-)
G131741 NA non-coding upstream 27100 1900593 ~ 1915550 (-)
G131751 NA non-coding upstream 73954 1947447 ~ 1948939 (-)
G131756 NA non-coding upstream 126916 2000409 ~ 2002192 (-)
G131833 NA non-coding upstream 185286 2058779 ~ 2059607 (-)
G131871 NA non-coding upstream 361119 2234612 ~ 2236805 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 5919 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 151465 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 165692 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 864554 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1060534 790008 ~ 810157 (-)
G131863 NA other upstream 420140 2293633 ~ 2296453 (-)
G132117 NA other upstream 587614 2461107 ~ 2461750 (-)
G132140 NA other upstream 693252 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 736235 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 769170 2642663 ~ 2643456 (-)

Expression


Co-expression Network