AMCG00011658


Basic Information

Item Value
gene id AMCG00011658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1902372 ~ 1904818 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011658
TTTGTGCGGTACTTCGAGCGCAGCGCCAGCGCCGTGTCCTGGATCACCTCCACCGGCATCGCCATGCAGCAGCTCGCCAGCCCGGTCGCGACGGCGCTGTGCAATGCCTATGGGGCGCGGCCGGTGGTGATGGCGGGGGGGCTGCTGTCGGGGCTGGGGCTGGTGCTGGCATCTCTGGCCAGCAGCCTGACGCACCTGTACCTGTCGGTGGGGCTCGTTTCCGgCATGGGCTGGGCGCTGGTGTTCACGCCCACGGTGGGCTCGGTGATGCAGTACTTCGAGCGGCGCCGGTCGCTGGCCATGGCTCTGGGCTTCACCGGCGTCGGCCTGTCGTCCTTCGGCTTCTCTCCGCTGTTCCAGCTGCTCGTGGAGAGCTACGGCTGGCGCGGTGGGCTGCTCATCCTGGGGGGCCTCAGCTTTAACATGGTGGCCTGCGGGGCGCTGATCCGGCCCGTGCCCCAGGGAGGGGGCGAGCAGgcCTGCAGTGATTCGAACCACACCGCCGCCGCCGCCCACCTGACCTGGCGGTACCGGCTGGCGGCCCACCTGGAGCTCTCCCTGCTGTGCCAGCCGGCCTTCCTGGCCTATGCGCTGGCTGTGACGCTCTTCAACGCCGGCTACTTCGTGCCCTACGtccacctggtggcccactgcCGCCAGCAGGGCTTCTCCGAGTACCAGGCCGCCTTCGTCATCTCCGCCACCGGCGTCACCGACCTGCTGGGCCGCCTGGCGTCCGGCTGGCTGTCGGACCTGGGCCTGCTGCGGCTGCCCCACCTGGTGGCCTTCTGGACGGGTATGACCGGGCTCTCCATCATGGCCATGCCGCTGGGCACGTCGTACGCGGGGCTGCTGGCGCTTGGCCTGGCCTACGGGTTCTGCGCCGGCGCCATGACCCCCGTGGTGTTCTCTGTGGTGCCCGATATCGTGGGCATGCGGCGGATGTTAGGCTGGCTCAGGGACGTCACTGGCAGCTACGTGGCGTCTCTCCTGGTGGCGGGCGGCTTCCTGCTGGCTGGCACCCTAGTGATGGGCACCCTGCCGCACTTCTGGTCCTGCGCCCGGACCCCCCGGACCCCTGGTGCCGGACCCCAGGCCAACGGAACCGCGTCACCTGAGAGGGATCCCCTCCGACTGGACCCGGACGCCCCCGTCCCCCAACACGAGCCCGACCCTGAGAGCCCAGACTGCACGCCCCCCCACCCGGCTGCCGGGCTGGAGTGCTGA

Function

GO: NA

KEGG:

id description
K08189 SLC16A13; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011658 True 1227 mRNA 0.70 5 1902372 1904818

Neighbor

gene id symbol gene type direction distance location
AMCG00011649 NA coding downstream 27136 1873505 ~ 1875236 (-)
AMCG00011651 NA coding downstream 28879 1870691 ~ 1873493 (-)
AMCG00011650 NA coding downstream 77561 1818991 ~ 1824811 (-)
AMCG00011647 NA coding downstream 103266 1797632 ~ 1799106 (-)
AMCG00011642 NA coding downstream 130087 1767578 ~ 1772285 (-)
AMCG00011659 NA coding upstream 6826 1911644 ~ 1915846 (-)
AMCG00011660 NA coding upstream 31917 1936735 ~ 1940512 (-)
AMCG00011657 NA coding upstream 74340 1979158 ~ 1983086 (-)
AMCG00011666 LOC107750560,LOC106608953,LOC107561748,LOC104962535,LOC105895561,LOC105027200 coding upstream 117890 2022708 ~ 2031267 (-)
AMCG00011667 NA coding upstream 147193 2052011 ~ 2053551 (-)
G131709 NA non-coding downstream 23081 1866793 ~ 1879291 (-)
G131691 NA non-coding downstream 56651 1775489 ~ 1845721 (-)
G131633 NA non-coding downstream 233692 1666554 ~ 1668680 (-)
G131625 NA non-coding downstream 259344 1642805 ~ 1643028 (-)
G131615 NA non-coding downstream 270612 1631457 ~ 1631760 (-)
G131751 NA non-coding upstream 42629 1947447 ~ 1948939 (-)
G131756 NA non-coding upstream 95591 2000409 ~ 2002192 (-)
G131833 NA non-coding upstream 153961 2058779 ~ 2059607 (-)
G131871 NA non-coding upstream 329794 2234612 ~ 2236805 (-)
G131873 NA non-coding upstream 341953 2246771 ~ 2247129 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 37600 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 183146 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 197373 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 896235 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1092215 790008 ~ 810157 (-)
G131863 NA other upstream 388815 2293633 ~ 2296453 (-)
G132117 NA other upstream 556289 2461107 ~ 2461750 (-)
G132140 NA other upstream 661927 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 704910 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 737845 2642663 ~ 2643456 (-)

Expression


Co-expression Network