AMCG00011660


Basic Information

Item Value
gene id AMCG00011660
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1936735 ~ 1940512 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011660
ATGAGGTCAGCGGTGCAGCTCTGGACCACACTTTCCATCTCTCGAGTCGAGTTGATAACAACATCGAGACCCAGACCCATGTCAGCTATCGCCTGTGTCACTCTGAGCACCTCTGCTCGAGGCATGATGTGGTTTTTTGGGGACCTGTGCCAACCCCCTGTCCCTTCCGATTGGCTGCTCCCTGTCCCCACGTCCCCTCGTCCCCCCGTCCCCCCGCAGGCTCCGTCCCCCTCTCCCGCCATTGGCTTGGCGCCTCATCGGGAGGTGTATAAGAGCCGGACACCCTGGCTCGGGGGGACCAGTCGGGTCTCCGATTACGGCTTTTCTTCAAGGGCAATAGACCAACGCACGGTTCTGAAGATGATCCTGTGCTCCCAGCTGCAGGTCCTGTTGGTGGCCCTGTCCGCCTCCGTGCTGCTGACCCGGGTGGGCAGCGCGGTGCCCCCGGGGGAGAGACTGTCCGCTCTAGTGAGGACGGGGGACCCGGAAGGCAAGGAGGTGAGTCGGAGGCTGTTCGCACCATTACAGCAGCGGGGACGGGCAAATATGGACTCCACAGCCTCTGAGAGCCTGGGCGCTGGCCACACCTGGGCGATCACAACTGACTGGCTCTTCTTCCCCCTCCATGTCCCCCGACAGGACCTCTCTCGCGTCCTGCTGCTGAAGGTGCTAAGCGGCCTCCTGCGGgccgaggaagaggaggcagcGCCGCCCGTCTCGGCCGAGGACGCCGGGATCCGAGAGGAGGTGGCGCGGCAGCTGCCCCTGTCTCAGCGCGAGCGCAAGGCCGGCTGCCGCAACTTCTACTGGAAGACCTTCACCACGTGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011660 True 831 mRNA 0.64 3 1936735 1940512

Neighbor

gene id symbol gene type direction distance location
AMCG00011659 NA coding downstream 20889 1911644 ~ 1915846 (-)
AMCG00011658 NA coding downstream 31917 1902372 ~ 1904818 (-)
AMCG00011649 NA coding downstream 61499 1873505 ~ 1875236 (-)
AMCG00011651 NA coding downstream 63242 1870691 ~ 1873493 (-)
AMCG00011650 NA coding downstream 111924 1818991 ~ 1824811 (-)
AMCG00011657 NA coding upstream 38646 1979158 ~ 1983086 (-)
AMCG00011666 LOC107750560,LOC106608953,LOC107561748,LOC104962535,LOC105895561,LOC105027200 coding upstream 82196 2022708 ~ 2031267 (-)
AMCG00011667 NA coding upstream 111499 2052011 ~ 2053551 (-)
AMCG00011673 NA coding upstream 157136 2097648 ~ 2116839 (-)
AMCG00011672 acadvl,LOC107738021,LOC107595296,LOC107731915,LOC107597078 coding upstream 214567 2155079 ~ 2180288 (-)
G131741 NA non-coding downstream 21185 1900593 ~ 1915550 (-)
G131709 NA non-coding downstream 57444 1866793 ~ 1879291 (-)
G131691 NA non-coding downstream 91014 1775489 ~ 1845721 (-)
G131633 NA non-coding downstream 268055 1666554 ~ 1668680 (-)
G131625 NA non-coding downstream 293707 1642805 ~ 1643028 (-)
G131751 NA non-coding upstream 6935 1947447 ~ 1948939 (-)
G131756 NA non-coding upstream 59897 2000409 ~ 2002192 (-)
G131833 NA non-coding upstream 118267 2058779 ~ 2059607 (-)
G131871 NA non-coding upstream 294100 2234612 ~ 2236805 (-)
G131873 NA non-coding upstream 306259 2246771 ~ 2247129 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 71963 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 217509 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 231736 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 930598 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1126578 790008 ~ 810157 (-)
G131863 NA other upstream 353121 2293633 ~ 2296453 (-)
G132117 NA other upstream 520595 2461107 ~ 2461750 (-)
G132140 NA other upstream 626233 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 669216 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 702151 2642663 ~ 2643456 (-)

Expression


Co-expression Network